Raphanus sativus (radish): 108823836
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Entry
108823836 CDS
T06014
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108823836
Transcription machinery [BR:
rsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108823836
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
108823836
NCBI-ProteinID:
XP_018452621
UniProt:
A0A9W3CDP0
A0A6J0KYS9
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Position
9:complement(30108912..30112143)
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AA seq
515 aa
AA seq
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MGVVFISSSAARSPLGLSTDLLTHRSSLKKLPSIVAFKADDSTSNSSLIVPPEQVLEKQK
EKRVVVTRRKPKAPNQNLAPSCPLGVDYNEAAARLESIYKLSPPATTLEEDGIDGGGSKG
KVSRRRKRKESGGGVEEKKVVVVIRSNGGKKEKRLDLDKRIALKRNVQEKQVIVSAHKKV
TKRQQEEEEKMKRLVRDYSASNDVVSLDWKKMKIPPVLSSSEHVWLFKLMQPMKALLQVK
DELQQSLGREPREAEIAGEINMSVAEVKMKIKVGKAARNKLIKHNLRLVLFVMNKYFQDF
TNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGL
ESVRVEIYKAKMELLFELGILPTEEEVVERLKISPERYREVLRAANPVYSLNSKHSVTQE
EFINGITDVDGVGADDRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA
GNLNISREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcgagttccgctgcaagatctcctctagggttaagcactgat
ctcttgacgcatcggtcttcactcaaaaagctgccgtccattgttgctttcaaagctgat
gattccacgagcaactcatctttgatcgttcctcctgaacaagttttggagaagcaaaag
gagaagagagtagtagtaactaggaggaagccgaaggcaccgaatcaaaacttggctcct
tcgtgtccgttaggagtggattacaacgaagctgctgctagactagaaagcatttacaaa
ctcagccctcctgcaacaacactggaggaggatggtatcgacggcggcggctccaaaggg
aaagtttcacggaggaggaagaggaaagagagtggtggtggtgttgaagagaagaaagta
gtagttgtgatcaggagtaatggggggaagaaggaaaagagactggatcttgataaacgg
atcgcgttgaagagaaacgttcaggagaaacaagttatcgtttcggctcataagaaagta
acaaagaggcagcaagaggaagaggagaagatgaagaggcttgtgagagactactctgct
tctaatgatgtagtcagcttggactggaagaaaatgaagatacctcctgttctttcttct
tctgaacatgtttggttgtttaagttgatgcaacctatgaaggctcttcttcaagtgaaa
gatgaattgcaacagagcttgggaagagagcctagggaagctgaaatagctggagagatc
aatatgagtgtggctgaagtgaaaatgaaaatcaaagttggtaaagctgcaaggaacaaa
cttattaagcacaatctccgccttgttttgtttgttatgaacaaatactttcaagatttc
accaacggaccgaagttccaggacctctgtcaagccggtatgagagggcttatcacagca
atagaccggtttgaaccgaaaaggaagtttcgtctttccacttatggtttgttttggatt
agacatgccatcatacggtctatgacaacctcaaactttactcgtgtcccatttggactt
gaatcggttagagttgagatctataaagcaaagatggagctattgtttgagctaggaata
ctccctacagaggaagaggtagttgagagactcaagatatcacctgagagataccgtgaa
gtcttgagagctgctaatccggtttactcgctgaactcaaaacattcggttactcaagaa
gagttcatcaatggaatcacagatgttgatggtgtaggagctgatgacaggagacaacct
gctcttctcaggctcgctctcgacgacgtgctggattcgttgaagcctaaagagagtctt
gttattcgacaaagatacggtcttgatgggaaaggagacaggacactaggagagatagct
ggtaatctcaacatctctagagaaatggtgaggaaacatgaagtcaaagccttgatgaag
ctcaagcatcaggctcgtgttgattaccttcgtcaatacatcatctga
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