Raphanus sativus (radish): 108823988
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Entry
108823988 CDS
T06014
Name
(RefSeq) sister chromatid cohesion protein SCC4 isoform X2
KO
K11266
MAternally affected uncoordination
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108823988
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108823988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
TPR_2
DUF2203
Seryl_tRNA_N
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
108823988
NCBI-ProteinID:
XP_018452812
UniProt:
A0A6J0KY46
LinkDB
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Position
9:complement(11923646..11927336)
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AA seq
724 aa
AA seq
DB search
MEGAAVAEGLWGLADHHEKLGDIGKTIKCLEAICQSQISFLPLVEVKTRLRVSALLLRYS
HNVNHAKSHLERSLLLLKSIPSSFDLKFRTFSLLSHCYHLLASFPPQRNLLLKALELASS
VPQDLSAYLWSCNFNSQLANTFIIQADFPSSLSALESGFLSASHICFPELQMFFTASMLH
VHIMQWTDDYSVEKAVQRCDDIWQTVSSDKTERCPGLFFYNEMLHVFYRLRLCDYKNAQH
HVDRLDQAMNAHSHKTQEVQQLQDELSSLSHSLSRNDLPYRERAALSDRQSQLQDRVNAL
SQSSTTTANSLEPAFFGNMDRAWTERLLLSQSPIDGEWLPKSAIYALVHLMVVISGRPKG
LFKECSKRIDSGMLIIQDELIKLGITDEVREADLRHTAIWMSGIYLMLQMQFLENKVALE
LTRSEYVDAQEALVEMKNLFTRFPTILQASECVIEMLRGQYSHSVGCYGEAAFHSIQASK
LTESKSLQATCQAFAAVSYLTIGDADSSSKALDLIGPLYGITNSLSGVREEASILFAYGL
LLMKQQDLQEARNRLAKGLQIAHTHMSNLQLVSQYLTLLGNLALSLHDTVQAREILRSSL
TLAKKLSDIPTQLWVLSSFTALYQQLGEKGSEMENEEHRKKKWDEMQSRLAEARGSIHHI
ELVEKARLEMDRVEDAQEQCEVTYGMQASLDIPESVGIEGPSPAQYSSRLVGLDTGKRWG
KRRV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgctgcggtggcggaaggtctgtggggactagcggatcaccacgagaagctt
ggcgacatcggcaaaacaataaagtgcttagaagccatctgccagtcccaaatctcgttc
cttcctctcgtcgaagtcaagacacgactccgcgtctcagctctcctcctccgttactct
cacaacgtcaaccacgccaagtcccatctcgagcgctctctcctcctcctcaaatccatc
ccttcctccttcgatctcaagttccggactttcagcttgctcagccactgttaccacctc
ctcgcttccttccctcctcagcgcaacctcctcctcaaggctctcgagctcgcttcctct
gtccctcaggatctctctgcttacctctggtcttgtaatttcaactctcagctcgctaac
accttcattatccaagctgatttcccttcttccctctccgctctcgagtctggctttctc
tccgcttctcacatctgtttccctgagctccagatgttcttcactgcatctatgcttcac
gttcatatcatgcaatggaccgatgattattcagtggaaaaggctgttcagagatgtgat
gacatctggcagaccgtttcttcagacaagactgaaagatgccccggtttgttcttctac
aacgagatgcttcatgttttctaccgcctcaggctctgtgactacaagaacgctcagcat
cacgtcgaccgcttagaccaagccatgaatgctcactcccacaaaacccaggaggttcag
cagcttcaggatgagctcagttcgttgagtcatagtctctctcgtaacgaccttccctac
agggaaagagcagcactctccgacagacagtctcagctccaggatcgtgtaaatgcattg
tctcaatcttctactaccactgctaactctctggagcctgcgttctttggcaatatggac
cgtgcgtggacggagaggctactgctttcacaatctccgatcgatggagagtggctaccg
aaaagtgccatctatgctttggtccatcttatggttgtcatatccggacgtcccaaagga
ctctttaaagagtgttcaaaacgtattgactctggaatgctcatcattcaagacgaactg
atcaagcttggaattactgacgaagttagagaagctgatttacggcacacagctatctgg
atgtctgggatatatctaatgctacagatgcagttccttgagaataaagtggccttggaa
cttacaaggtctgaatacgtcgacgcacaagaggctctggttgagatgaaaaatttgttt
actcgatttccaacgatcttgcaagcgtctgagtgtgtgattgagatgctcagggggcaa
tacagtcactccgtcggttgctatggtgaagctgctttccattctatccaagcttctaag
ttgacagagagtaaatcgttgcaagctacgtgtcaagcttttgcagctgtttcttacctt
acaataggagatgctgactcatcatcaaaggcacttgatttgattggaccactctatgga
ataacgaattcactatctggtgtgcgagaagaagctagtattctctttgcttatggtctc
cttttgatgaagcaacaagatctacaggaagcaagaaaccggcttgccaagggtttgcag
atagcgcatactcatatgagtaacctgcagctagtttcacagtatttgacactcctggga
aatctggctctttccttacacgacacggtacaagccagagagatccttcgttcctctctt
acacttgcaaagaaactctctgatatccctactcagctatgggttctatccagcttcaca
gctctgtatcagcagttgggtgaaaaagggagcgagatggagaacgaagaacacaggaag
aagaaatgggatgagatgcagagtagactagctgaagcgcgtggatccatccatcacatt
gaactagtggagaaagctaggttagaaatggatagggtggaggatgcacaagaacagtgt
gaagtaacatacgggatgcaagcgagtctggacattccagagtctgtgggtatagaaggt
ccatcaccggcacagtactcctcgaggcttgtaggtttagacacgggaaaaagatgggga
aaacgaagggtatga
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