KEGG   Raphanus sativus (radish): 108824703
Entry
108824703         CDS       T06014                                 
Name
(RefSeq) autophagy-related protein 3
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04136  Autophagy - other
rsz04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    108824703
   04136 Autophagy - other
    108824703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108824703
   04121 Ubiquitin system [BR:rsz04121]
    108824703
   03029 Mitochondrial biogenesis [BR:rsz03029]
    108824703
Membrane trafficking [BR:rsz04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    108824703
Ubiquitin system [BR:rsz04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   108824703
Mitochondrial biogenesis [BR:rsz03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108824703
SSDB
Motif
Pfam: Autophagy_act_C
Other DBs
NCBI-GeneID: 108824703
NCBI-ProteinID: XP_018453606
UniProt: A0A6J0L1S0
LinkDB
Position
2:26205301..26207516
AA seq 310 aa
MVLSQKIHGAFKGAVERMTGPRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWEAGDPS
KRKPYLPLDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGRPKDKSN
EDEDLPSMDALDINERDTIQHSPRCDGGEEEEEDIPDMEDFDEIDNDPATLQSNFLVAHE
PDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKTVTIE
DHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYT
MDFDLGSSST
NT seq 933 nt   +upstreamnt  +downstreamnt
atggtgctttcgcagaagattcatggagcattcaaaggtgcagtggagaggatgaccggt
cctcgaacggtctcagctttcaaggagaagggagttctcagcgtcagcgagttcgttctc
gccggcgataacctcgtctccaagtgccctacctggtcatgggaagctggtgatccaagc
aaaaggaagccgtacttgcctttagacaagcagtttttgatcactaggaatgtaccttgt
ctacgaagagctgcgtctgtggcggaggattacgaagctgctgggggtgaagttttggtt
gatgatgaagataatgatggttggcttgctactcatggaagacctaaagataaaagcaat
gaagatgaagacttgccatccatggatgccttggatataaacgagagagatactattcaa
cattcacctaggtgtgatggcggcgaggaggaggaggaagatattccagacatggaagat
tttgatgagattgacaatgatcctgcaactcttcagtcgaattttcttgtggctcacgaa
ccagatgacgataatatccttaggaccagaacatatgatgttagcatcacgtatgacaag
tattaccaaactccccgtgtttggttaaccggctatgatgagtcaaggatgttactgcaa
cctgaacttgtaatggaggatgttagtcaagaccatgcgcgtaaaacggtaacaatagaa
gatcatccgcacttacctgggaaacatgcttcagttcatccatgtcgtcatggagctgtt
atgaagaagatcattgatgtcttaatgtcacgtggagtagagcctgaagttgacaagtat
ctcttcttgttcttgaagtttatggcatcggttattccaacaatcgagtatgattacaca
atggactttgatctcggtagctcaagcacttga

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