Raphanus sativus (radish): 108824731
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Entry
108824731 CDS
T06014
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108824731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108824731
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108824731
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108824731
NCBI-ProteinID:
XP_018453627
UniProt:
A0A6J0L0F6
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Position
9:10416326..10418936
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AA seq
755 aa
AA seq
DB search
MNFRPDKFVRSVFFYSILSLQTLVPGSLNLDHLLYQRFHDWKSDKTSELEHSERTEVTRG
IFRRAISSISDKFHRSSAMIKMFRPSYKSYSFKEAVSKGIVSTHEILDPQGPFLQRWNKI
FVLACIIAVSVDPLFFYVPVLDKANNCLDVDDRMQTTASVLRSITDMFYAIHMVFQFRTG
FIAPSSRVFGRGVLVEDRREIARRYLSSQFIVDILAVLPLPQMVISVIIPCIKRSRPLHT
KNMLKFIVFFQYIPRFMRIYPLYKQVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWY
LFSIERKTVCWKQACSKRGLCKISSLYCLPQQNKRTLGNITSLNEACPVLEQNTTRFDFG
IFLGALDSGVVESHDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIWENCFAVFISISGLVL
FSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMAHRLLPENLRQRIRRYEQYKWQETRGV
NEENLLSNLPKDLRRDIKRHLCLALVMRVPMFEQMDEQLLDALCDRLQPVLYTEESYIVR
EGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEHLGAGDFCGEELLTWALDPHTSTNLPIS
TRTVQALMEVEAFALKADNLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAFWRR
CVKKRLEESLREEENRLQDALAKEACGSSPSFGATMYASRFAANILRTVRRSGSVHKPRM
LERMPPMVLLQKPAEPDFYSDGYMHIVPIYKNRSL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgaccagacaagttcgttaggtcagtcttcttttacagtatattgtctctt
caaactctagttcctggatcgcttaatctcgatcacttgttgtatcaaaggtttcacgac
tggaagtccgacaagacttccgagttggaacactccgagagaaccgaagtgacacgtgga
atattccggagagcaataagctcaatctccgacaagttccacagaagctcggcgatgatc
aaaatgttcagaccatcttacaagtcttactcgttcaaagaagctgtatcgaaagggatc
gtttccactcacgagatacttgacccacaaggacctttccttcagagatggaacaagatc
ttcgttctagcttgcatcatcgctgtctctgtcgaccctctcttcttctacgtccctgtc
ctcgacaaggccaacaactgccttgacgtcgacgacagaatgcagacaaccgcaagcgtt
ctgcgctccatcaccgacatgttctacgccattcacatggtcttccagttccgtacaggc
ttcatcgctccttcttctcgtgtcttcgggagaggtgttcttgttgaggacaggcgtgag
atcgctagacgttacttgtcatcgcaattcatcgttgacattcttgccgtgcttcctctt
ccacagatggtgatttcggtaatcattccgtgtatcaaaagatccaggcctttgcacacg
aagaatatgttgaagttcatcgtcttcttccaatacataccgaggtttatgagaatctat
ccgctctacaagcaagtgacgagaacctcagggatacttacagagacagcttgggcagga
gctgcttttaatctattcctctacatgcttgctagtcacgtgtttggtgctttctggtat
ttgttctctatcgagcgcaaaactgtgtgctggaaacaagcttgcagcaaaagaggactc
tgcaaaataagctcgttgtattgtcttcctcagcaaaataagaggactttaggaaacata
acttccctcaatgaagcttgtccggttctggaacaaaacacaacacgtttcgactttggg
atattccttggcgcacttgattcaggtgtagtggagtctcatgatttccctcagaagttc
ttttactgtttctggtggggtcttcaaaacctcagttcgctcggtcaaaaccttaaaaca
agtacatacatttgggagaactgtttcgctgtcttcatctctatctccggactggttctg
ttctcgttcttgatcggcaacatgcagacgtatctgcaatcaacaaccacgaggctggag
gagatgagagtcaagagaagagacgcagagcaatggatggctcaccgtctgctccctgag
aatctaagacaaagaatacggcgatacgagcagtacaaatggcaagagacaagaggcgtt
aacgaagagaatcttcttagtaaccttcctaaagatcttagacgcgacatcaaacgccat
ctctgtctcgcccttgtcatgcgggtccctatgtttgagcagatggacgagcagcttctt
gacgctctctgtgaccgtctgcagcctgtgctgtacacagaggaaagctacatcgtcagg
gaaggagatcctgtggatgaaatgctcttcataatgcgtgggaagcttctaacaatgaca
acaaacggtggaagaacaggcttctttaactcagagcatcttggagctggcgatttctgc
ggtgaggagcttctgacctgggctttagacccacacacgtccacaaacctcccaatctca
acgagaaccgttcaagctctcatggaagtcgaagctttcgcactcaaagctgacaacctc
aaattcgtggcttctcagttcagacgtctccacagcaaacagctgagacacactttcagg
ttctactctcagcaatggaggacttgggctgcttgcttcatacaagccttttggagaaga
tgcgtgaagaagagactagaggagtctcttagagaagaagagaaccggttgcaagacgct
ttggctaaagaagcttgtggaagctccccaagctttggtgctaccatgtacgcgtcacgg
tttgctgcaaatatcttgaggactgtacgtaggagcggttcggtacataaaccgaggatg
ctggaacgaatgccacctatggttctacttcagaaaccagcagaaccagatttctatagt
gatggttatatgcatatagtgccaatatataaaaatagaagtctttaa
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