Raphanus sativus (radish): 108825302
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Entry
108825302 CDS
T06014
Name
(RefSeq) ABC transporter B family member 22-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108825302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108825302
04147 Exosome [BR:
rsz04147
]
108825302
04090 CD molecules [BR:
rsz04090
]
108825302
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108825302
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108825302
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108825302
CD molecules [BR:
rsz04090
]
Proteins
108825302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
ABC_ATPase
AAA_15
AAA_16
Zeta_toxin
AAA_30
RsgA_GTPase
AAA_23
AAA_28
AAA
DEAD
DLIC
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
108825302
NCBI-ProteinID:
XP_056851185
UniProt:
A0A9W3CI68
LinkDB
All DBs
Position
9:32068910..32074774
Genome browser
AA seq
1233 aa
AA seq
DB search
MKSWGRSIRSIFMHADGVDWMLMGLGLIGAVGDGCITPIIFFITSLLLNDLGGSLNDGNF
MKAITKNATALLYVAGASWVLCFLEGYCWTRTGERQAARMRERYLKAVLRQDVGYFDLHV
TSTSDVITSVSSDSLVIQDVLSEKLPNFLMTASAFIASYIVAFNMLWRLTIVGFPFVVLL
LIPGLMYGRALINISRKIREEYNEAGSIAEQAISLVRTVYAFGSETKLIAKFSSALQGSV
KLGLRQGLVKGISLGSTGIVYAIWAFMTWHGSRMVMYHGAKGGTIFAVIICINFGGTSLG
RGLSNLKYFAEAVVSGERIMEVIQRVPDIDSDNLEGQTLEKIKGEVEFKHVKFMYPSRPE
TPIFNDFCLRVPSGKTVALVGGSGSGKSTVLSLLQRFYDPVSGEILLDGVSINKLQVNWL
RLQMGLVSQEPALFATSIEENILFGKEDAPMDEVVEAARASNAHNFISQFPHGYKTQVGE
RGVQMSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQEALDNASLGRTTIVIA
HRLSTIRDADVICVVQDGRIVEAGSHEELMEDFDGQYTSLVRLQQMDKQEPDGNTSVRVE
GGQLSILSKDLKYGPKLSTQSESNLLTSSSVDSNIPGSVPKNKKPPVPSFKRLMAMNRPE
WKHALYGCLSAALYGGVQPLSAFVSGSMVSVYFLTSHDEIKEKTRIYVLLFVGLAVFTFL
FNIIQHYSFAYMGEYLTKRIREKMLTKILTFEVNWFDEEENSSGAICTTLAKEANLVRSL
VGERVSLLVQTISAVAVACTVGLVIAWRLAILMIAVQPLVVVCFYMQRILLKSISKKSIK
AQDESSKLAAEAVSNIRTITSFSSQERILKLLKRVQEGPRKESVRQSWLAGTVLATSRSL
ITCTSVLNFWYGGRLITAGKIVTKQFFQIFTVFVSTGRVVADAGSMTTDLAKGSDAVGSV
FAVLDRSTTIDPESPDGYVTEKIKGQISFVNVDFSYLTRPNVVIFKNLSIEIEEGKSTAI
VGPSGSGKSTIISLIERFYDPLKGCVKIDGRDIKSYHLRSLRQHIALVSQEPALFAGTIR
ENIMYGGGASKNVSESEIIEAAKAANAHDFITSLTNSYDTNCGDRGVLLSGGQKQRIAIA
RAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLSTIQNCDVIAVLD
KGKVVECGNHSTLLAKGPTGAYFSLVSLQRNLS
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttggggaagaagcataagatcgattttcatgcacgcggacggtgtggactgg
atgttgatgggactaggattgatcggagccgtcggtgatggctgcatcactcctattata
tttttcatcaccagcttactactgaatgacctcggtggttcgctcaatgatggaaacttc
atgaaagccatcaccaagaatgctacagctttgctttatgtggctggtgcatcatgggtg
ctatgttttcttgaaggatattgctggacaagaacaggggagagacaagcagcaagaatg
agagagagatacttaaaagcagtcttaagacaagatgtgggttactttgatcttcatgtc
actagcacttctgatgttatcacaagtgtttctagtgacagtcttgtcatacaagacgtc
cttagcgaaaagctaccgaactttttgatgactgcgtctgcgtttattgcaagctacata
gtagctttcaacatgctgtggagactcacaatcgtaggcttcccgttcgtcgttctcctc
ttgatccctggactgatgtatggacgagcactcatcaacatctcaaggaaaatacgtgaa
gagtataatgaagctggttctatcgctgagcaagccatctcgttggtgcgaacagtctat
gcatttggtagtgagacgaagttgatagctaaattctcatccgcgcttcaaggctcggtg
aaactagggctgagacaagggctagttaaaggaatctcacttggtagcactggtattgtt
tacgccatttgggcgttcatgacatggcatggaagtcgaatggttatgtaccatggcgct
aagggtggtaccatctttgcagtcatcatttgcattaactttggtggcacatcacttggt
cgaggtttgtcgaatctcaaatacttcgcagaagcggttgtatcaggggaaaggatcatg
gaagtgatacaaagagttccagatattgactcagacaaccttgaaggtcaaactctagag
aaaatcaaaggagaagttgaatttaagcatgtgaagttcatgtacccctctagaccagaa
actccaatatttaatgacttctgtttgagagttccgtcaggaaaaactgtggctctagtt
ggtggaagcgggtcgggaaaatcaacggtgttgtcacttctccagaggttttatgatcca
gtctctggagagattctacttgatggtgtgtccattaacaagttgcaagttaactggttg
agattgcagatgggtttagtcagccaagagccggctctcttcgctacatccatagaggag
aacatactatttggtaaagaggatgcacccatggatgaagtggtggaagcagcaagggcc
tcaaatgctcataacttcatctctcagttccctcatggatacaaaactcaggttggagag
agaggagtgcaaatgtcagggggacagaagcagaggatagcaattgcacgtgccataatc
aaatcaccaaccattctccttctagacgaggcaacaagtgcattggactcagaatctgaa
agagtagtccaagaagccttggacaatgcctctcttggccgtacaactattgttattgcc
catcgcctctctactattcgtgacgctgatgttatctgtgtagtccaagatggtcgcatt
gtagaagctggttcacacgaagagctcatggaggactttgatggtcaatatacttcttta
gtccgcttgcaacagatggataagcaagaaccggatggtaacactagtgtaagggtggaa
ggaggtcagttatcgatattgagcaaagatttgaagtacggtccaaaactgtctactcaa
agcgagtctaacttgttaacgagttcaagtgttgactcgaatatccctggttcagttcct
aagaataagaagccacctgtgccatcttttaagagactgatggcaatgaatagaccagag
tggaaacatgccttatacggttgcttaagtgcagctttatatgggggagtacaaccacta
agtgcatttgtttcgggatctatggtgtcagtatatttcctaacgagtcatgacgagatc
aaggagaagacaaggatctatgtcttgctctttgttggcctagctgtctttactttcttg
ttcaatatcattcaacattatagttttgcttacatgggagagtacctaacgaagcgtatc
cgagagaagatgcttacgaagatacttacctttgaagttaactggttcgatgaagaagag
aactctagtggtgcaatttgcacaacacttgcaaaagaagctaacttggtgcggtcgctg
gttggtgaacgagtgtcattgttggtacaaaccatatcagcagtggccgtagcctgcaca
gtaggtttagtcatcgcttggcgactagccatcctgatgatcgcggtgcagccacttgtt
gtagtatgcttctacatgcaacgcatcctcctcaaaagcatatccaagaaatcaataaaa
gcccaagacgagagtagcaagctagcagcagaagctgtctccaacatccgaaccatcaca
tcgttctcatcacaagaacggatcttgaaactactcaaaagagttcaagaaggtccaaga
aaagaaagcgtacgccaatcatggctagctggaaccgtcctcgcaacgtcacgaagcctt
ataacatgcacttcggttttgaacttctggtacggtggtagactaatcactgccggcaag
atcgtgacaaaacagttctttcagatctttacggtctttgtgagtactggtcgggttgta
gcagacgctgggagcatgacgaccgatctagctaaaggatctgatgctgtcgggtctgtg
ttcgcagtgttggaccgttccacgaccattgaccccgagagtcctgacgggtacgtaacg
gagaaaataaagggacagataagttttgtcaacgtggacttttcttacctcacacgacca
aacgtggttatattcaagaacttgtctattgagatagaggaaggaaagtcaacagctatt
gtcggtccaagcggttcaggaaagtcaacgatcattagcttgatcgaacggttctacgac
cctttaaagggatgtgttaaaatcgacggtcgtgatataaagtcatatcatttgagatcg
ctacgtcagcacatagctttggttagtcaagagccagcgttattcgctgggactatcaga
gagaacataatgtacggaggaggagcgtcgaaaaatgttagtgagtctgagattatagag
gcggctaaggcagcgaacgctcatgattttattacatcgttaacaaacagttatgacacg
aactgtggagacagaggtgtgctgttgtcgggtgggcagaaacagaggattgctatagct
cgtgcggttctgaagaacccgtcggtgctgctgctcgatgaagcgacgagcgctttggat
agtcagtcggagcgcgtggtgcaagacgcgctggagcgagtgatggttgggaggactagt
gtggtgatcgcccataggcttagcacgatacagaactgtgacgtcatcgcggttttggat
aaagggaaagtagtggagtgtgggaaccactcgacgttgttggcgaagggtcccacgggt
gcttatttctcattggtcagtctccaaagaaatctctcttaa
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integrated database retrieval system
