Raphanus sativus (radish): 108825459
Help
Entry
108825459 CDS
T06014
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108825459
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Others
EARP complex
108825459
Endosome - Golgi transport
Tethering complex
GARP complex
108825459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SPG48
Motif
Other DBs
NCBI-GeneID:
108825459
NCBI-ProteinID:
XP_018454248
UniProt:
A0A6J0L2Z5
LinkDB
All DBs
Position
9:3957771..3965082
Genome browser
AA seq
767 aa
AA seq
DB search
KALSKLYEELRTDFIREKVDRSLKKHLSSLESPPNLLRTANCFCIGRVGSSILLLSISND
VRRISIDALGQAVGDFGSHEKLGFDLGAYVGDLAFEEDSGSEDISLEGLQQELEECESDE
VVANILSSGAKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIHDCDSILSQMET
LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG
EVNEEYIRTLEILSKKLKFVAADPAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIA
LRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFRAYIQAL
EKLQLDIATAYDLIGVETRSAGLFSRAREPLKNRSAVFALGERIKIIKEIDQPALIPHIA
EASSLKYPYEVLFRSLHKLLMDTATSEYIFCDDFFGEESIFYEIFAGPFSVIDEHFNPVL
TNCFDAIGLMLMIRIIHHHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDSHISSLRDA
NVKTLWEDDVHPHYVMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDVLILKLAKLF
PRPKQQIVFLINNYDMTIAVLKEAGPEGGKIQMHFEELLKSNTSLFVEELLVEHFSDLIK
FVKSRASEDSSSNPERYITVAEVDPLVKDFGSRWKTAIELMHKDIITSFSNFLCGMEILR
AALTQLLLYYTRLTDCIKKIPGGSGLNKDLVSIQSIMFEIRKYSKTF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
aaagctctctccaaattgtatgaagaactcaggactgatttcatacgcgaaaaggtagat
cggagtttaaaaaagcatctctcgagtctcgaatctcctcccaatcttcttcgcactgcg
aattgtttctgtataggtcgagtgggatcgagcattcttctcctttccatcagcaacgat
gtccgacgcatctccattgacgcattgggtcaagccgtgggagactttggtagtcatgag
aaacttggatttgatttaggagcttatgttggagacttggcttttgaagaggattcaggc
agtgaggatatatctttggaggggcttcagcaagaactagaagaatgtgagagtgatgag
gttgttgccaatatactatccagtggtgccaaacttagagaatatgctaaaggtgttgag
aacaatctacggaaggtcgaattggattccattgaggattacataaaagaaagtgataac
cttgtctcacttcacgatcagattcatgactgtgacagcatcttgtcacaaatggaaacc
ctcctcagtggatttcaggaagagattggttctataagttccgatataaagattcttcaa
gaaaaatcgatggacatgggtttgagattgaaaaatcgcagggtggctgaatcaaagctt
gcaaaatttgtggaagacattatagtgccaccaaagatgatagatgtaattgtggatgga
gaggtgaatgaagagtacattagaacgcttgaaattctgagtaagaaactgaaatttgta
gcagctgatccggcggttaaaagttctaaagcattaaaagatgtagagcctgagctcgag
aagctccggcagaaagctatttccaaggtgtatgattttattgtccagaagcttatagcc
ctgaggaaacccaaaacgaacatccagattcttcaacagagtgtgttattgaagtacaag
tatattatctccttcctcaaagaacatggaaaagaagtgtttatggatgttcgtgctgca
tacattgataccatgaacaaggtgttaagtgcacattttcgtgcttatattcaagcactt
gagaaactacagttagatatagcgacagcatacgacttgattggggtggagactagaagt
gccggtctcttctcaagagctagggagccactgaagaatcgttctgccgtctttgctctg
ggtgagaggataaaaattataaaggaaattgatcaacctgcactgatcccgcacatagct
gaagctagctctctcaaatatccttatgaagtgctcttcaggagtttgcacaagctactt
atggatacagctacttctgagtatatattttgcgatgacttctttggcgaagagtctata
ttttatgaaattttcgcgggtccattttctgtcatcgatgagcacttcaatcccgttctt
acaaactgttttgacgctatcggcctgatgcttatgattcgcattatacaccaccaccag
cttatcatgtctcgccggaggattccatgcctagattcatatctggacaaggttaatata
tctttatggcctcgtttcaaaatggtatttgattcacacatcagcagtctgcgagatgca
aacgtaaagactttatgggaagatgatgttcatcctcactatgtcatgagacgttatgct
gaattcacagcttcgtttattcacctgaatgttgaatatggggatgggcagcttgatata
aatttggagcgcttacgaatggctgtagatgtcttgatcctcaagcttgcaaagttgttt
ccaaggccaaagcagcaaattgtgtttctcataaacaactatgatatgacaattgctgta
ctgaaggaagctggaccagaaggtggtaaaatccaaatgcattttgaggaattactgaag
agcaacacttcgttattcgtggaagaattgctggtggagcatttcagtgatttaatcaaa
tttgtgaaatctcgtgcttctgaggattcaagctcaaatccggagagatacatcacagtt
gctgaggtggatccgctggtgaaagactttggaagcaggtggaagacagcgatagagttg
atgcacaaagacatcataacttccttcagtaacttcctgtgtggtatggagatcctgaga
gctgcattgacacaactgttgctctattacacacggcttacagactgcatcaagaagata
cctggtggatctggtctgaacaaggatcttgtctccattcagtctataatgttcgagatc
aggaagtactctaagactttctaa
DBGET
integrated database retrieval system
