Raphanus sativus (radish): 108825546
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Entry
108825546 CDS
T06014
Name
(RefSeq) myosin-13 isoform X2
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108825546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108825546
04131 Membrane trafficking [BR:
rsz04131
]
108825546
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108825546
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108825546
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108825546
mRNA cycle factors
P-body specific factors
108825546
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108825546
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108825546
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108825546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Zeta_toxin
ProQ_C
AAA_22
nSTAND3
AAA_18
NPHP3_N
CbiA
APS_kinase
DUF87
RNA_helicase
HtaA
IQ_SCN5A_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108825546
NCBI-ProteinID:
XP_018454358
UniProt:
A0A6J0L3A4
LinkDB
All DBs
Position
9:complement(26315571..26324462)
Genome browser
AA seq
1460 aa
AA seq
DB search
MPSSTVKAGSFVWVKDPEEAWLDGEVIEVNGDDIKVQCTSGKTVVVKVSDTFPKDMEVPP
SGVTDMTTLAYLHEPGVLQNLKSRYHIDEIYTYTGDILIAVNPFKQLANLYNDHMIAHYK
GAAFGSLMPHPFAVADAAYRQMINEGVSQSILVSGESGAGKTETAKTLMKYLAKMGGRAV
KDLSSRRSVEDQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIKTYL
LERSRVCQVSDSERNYHCFYMLCAAPPEDIRKLRLEDPTTYRYLNQSRCIKLEGMDDSEE
YAKTREAMGIVGISSEEQEAIFRVLAAILHLGNIEFTNGEETDSSVPKDKKSLKIAAELF
MCDEQALEDSLCRRVMVTPEETISRCLDPESAAFSRDALAKFVYAKLFDWIVNKINNSIG
QDPDSKHMIGVLDIYGFESFKTNSFEQFCINLTNEKLQHHFNEHVLKMEQDEYKKEEIEW
NHIEFPDNWEVLELIEKKPGGIIALLDEACMFPRSTHETFSQKLYETLKKNKHFSKPKLA
RTDFTVCHYAGDVTYQTQQFLEKNKDYVVAEHQALLGASKCTFIAGLFPSLVEDASKQSK
FSSVASQFKLQLALLMERLSTTEPRYIRCVKPNNLLKPSIFENQNVLQQLRCGGMMEAIE
ICRAGFPTRKHFDEFLDRFSVLASSTLDKSSDEKAACKKLLEAVGLRGYQIGKTKVLLMA
GQMAELDARRTDVLGRAARIIQRKFRSYLLLKAAINIQALCRGQLARHIFEDLRRKEAAA
LKIQRALRIYLDRRSYKEAVVTVQSGLRGMAARNVLGRKTKATLAIQIHCRRYLAESHYK
KLKKAAITTQSAWRARLARKELRELKMAAKETGALQAAKSKLEKQVEDLTLRLQLEKRMR
VDVEESKTQENAKLQLALKEIQLQFKETKVSLSKEVEAAKKTAEMVSVVKEVPIVDTELV
EKLKSENENLKSMVSSLEQKIDETEKKFKEKVKQALEAEDKIVDLKTAMHKLQEKLEDVI
NENEVLKQSALSTPVKTASGRFFPATPLKNLQNAEANQLTGTMFTTPARIQESRGSHIDP
QEEDVEALISCVTKNVGFSQGKPVAAFTIYKCLLHWKSFEAEGTNVFDRLVQMIGSAIKN
EDDNANLAYWLSNTSTLLFMLQQSLRSGGNGATPLRKSPSLVRWMTKGFRSPAAEAIRPV
DAKAPALLFKQQLAAYVEKIIGIIWFKLKKDLNTSLTLCIQAPKTFKGTALMSDSTAKYW
QGIIEGLDALLSTLKENFVPLVLIHKILSQAFSLINVQLWNSVMTRPDNCSFINGEYVKS
GLEKLEVWCLETNEEYAGSSWDELKHTRQAVGFLLFHNKYKISYDEIAKKLCPVLRIQQH
FRLCTLYKDEIYNTKSVSQEVIENMAGVMTDSSDFLLKDDSSNSISLLIDDLSSSMQDKD
FAQVKPAEELVENPAFSFLQ
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttctacagttaaagctggctcgttcgtttgggtcaaagatccggaggaggca
tggttagatggtgaagttattgaggttaatggagatgatattaaggtccaatgtacctca
gggaagacggttgttgtcaaagtttcagacacatttccgaaagatatggaagttccacct
tctggagtgactgacatgacaacgctagcatatctacatgaaccaggggtcctacaaaat
ttgaaatcaagatatcatatagacgaaatatatacttacacaggagatatcttgattgct
gtgaacccttttaaacaactagcgaacctgtacaatgaccatatgattgcacattacaaa
ggagccgcctttggatcattgatgccccatccgtttgcagttgcggatgcagcttacaga
caaatgattaatgagggagttagtcaatcaatcttggtaagtggtgagagtggagcaggg
aagactgagactgctaaaacgcttatgaaatatctggccaaaatgggaggtcgagctgtc
aaagatctctcgagcagaaggagtgtcgaagatcaagttttggagtccaatcctgtttta
gaagcatttgggaatgcaaaaaccgttaggaacaacaattcaagtcgatttggtaaattc
gtggagattcagttcgatcaaaggggaaggatatcaggagctgctatcaagacttatttg
ttagagagatcaagggtgtgccaagtgtcagattctgagagaaactatcactgcttttac
atgctttgtgctgcaccaccagaggacattagaaaactaagactagaggatccaacaaca
taccgttatctgaatcaatctcgttgtatcaagttagaggggatggatgattcggaagaa
tatgctaaaaccagagaagcaatgggcattgttgggataagctcagaggagcaggaagca
atatttcgagttttggcagctattcttcatctgggtaacatagaatttaccaacggagaa
gaaacagactcttcagttccaaaagacaagaagtcactgaagattgcagctgagcttttc
atgtgtgatgagcaggcactggaagattctctctgcagacgtgtaatggtgacacctgaa
gaaacgatatctagatgtctggatcctgagtctgcagcatttagtagagatgctttggca
aaatttgtgtacgcaaaattgtttgattggatcgtaaacaagatcaataattcaattgga
caagatcctgactcaaaacacatgataggagtgttggatatatatggattcgaaagcttc
aagacaaacagttttgagcaattttgcatcaatttgacgaatgagaaacttcagcatcac
tttaatgagcacgtcttaaaaatggaacaagatgagtacaagaaagaagaaattgagtgg
aaccacatcgagttcccagataattgggaagttttggaacttattgagaagaaacctggt
ggtattattgctctcctggacgaggcttgcatgttcccaagatcaacacatgaaacgttt
tctcaaaagctgtacgaaacattaaaaaagaacaagcactttagcaagccaaaattagct
cgtactgacttcacagtttgtcactatgctggtgatgtaacctatcaaacccagcagttt
ctggaaaagaacaaagattatgttgttgctgagcatcaggctctgctaggtgcttccaag
tgcacttttattgcaggtttatttcctagtctagtggaagatgctagcaaacagtccaag
ttctcttctgtagcttcacaatttaagctacaactggcactattgatggaacgtcttagt
actactgagcctcgctatattcgttgcgtgaagcccaataatcttctgaagccctctatc
tttgagaaccaaaatgttctgcaacagctacgttgtgggggtatgatggaggcaatcgag
atatgccgtgctggatttcctacacggaaacattttgatgaattcctggacagatttagt
gtcctagcttcttctactttggataagagttctgatgagaaagcagcctgcaagaaactt
ctggaggcagttggactcagaggataccagattggaaagacgaaggttctcctcatggct
gggcagatggctgaattggatgctcggaggaccgatgtcttgggaagagcagccagaatc
atacagaggaaattccgctcctacctgctcctcaaagctgcaataaatattcaggctctg
tgcagaggtcaactcgctcgacatatatttgaggacttgcgcagaaaggaagcggctgct
ttgaagatccagagagctttgcggatctaccttgataggcggtcttacaaagaagctgtg
gttacagttcagtcaggtttgcgtggtatggctgctcgcaatgtactaggaaggaagacc
aaggccacacttgctattcagatccattgccgtagatacctggccgagtcgcactacaag
aagctgaagaaagcagcgattactacacaaagtgcatggagagcaaggctagcccgtaaa
gaactgcgagagcttaagatggctgcaaaggaaactggagccctacaagctgcgaagagt
aagcttgagaagcaagtggaagatctcacgctgagactgcagctagagaaacgcatgagg
gtggacgtggaagagagtaaaacacaagaaaatgcgaaactgcaattagcactgaaggaa
atacaactgcagttcaaggagaccaaagtgtctctctcaaaggaagtggaagctgcgaaa
aagactgcagaaatggtttcggtagtaaaggaggttcctattgttgacaccgagcttgtg
gagaaactcaagagtgaaaatgaaaacctcaagtccatggtaagttcgctggagcagaag
attgatgaaacagagaaaaaattcaaggagaaggtgaagcaggctttagaagctgaagac
aaaattgttgatttgaagaccgccatgcacaaactgcaagagaagctagaggatgtgata
aacgaaaatgaagttttgaagcaatctgccttaagcacacctgttaagacagcatcagga
cgtttcttccctgctactccactaaagaacttgcaaaatgccgaagcaaatcaactcact
ggaactatgtttacaacaccagcaaggattcaagaatccaggggttctcatattgatcct
caagaagaggatgtggaagccctaatcagctgtgtcacaaaaaacgttggatttagtcag
gggaagcctgtggcggcatttaccatctacaaatgtcttcttcattggaaatcctttgaa
gcagaaggaaccaatgtatttgatcgtcttgttcaaatgattggttctgctattaagaat
gaagacgacaacgctaacttggcatattggttatccaatacttcgaccttattgttcatg
ctacaacaaagtctcagatctggtggaaatggggccactccacttcgaaagtcaccttcc
ttggtccgatggatgaccaagggtttccgttctccagcagctgaagcgattcgaccagtt
gatgccaaggctccagctttgcttttcaagcagcagcttgcagcatatgttgaaaagatt
attgggattatctggtttaaactgaaaaaggatttgaacacttcccttactctctgcatc
caggcaccaaaaacgttcaaggggactgcgctaatgtctgatagcactgctaaatactgg
caggggattattgaaggactagatgcactgctaagcacacttaaagagaactttgttcct
ctggttcttatccacaagatattgtctcaggctttctcactcatcaatgtccaactgtgg
aacagcgttatgacgagaccagataactgttcgttcatcaatggagaatatgtaaaatct
ggtttagaaaagttagaggtttggtgcttggaaacaaatgaagagtatgctggctcatcc
tgggatgaactcaaacataccagacaggctgttggattcttgctcttccataataagtac
aaaatctcatacgatgagattgcaaaaaaattgtgtccagtccttagaatacaacagcat
ttcagattatgtactctgtataaggatgaaatctacaacacaaaaagtgtttctcaagag
gtcatagagaacatggcaggagttatgacagacagcagcgacttcttgttaaaagatgat
tctagcaacagcatatctctcttgatcgatgacttatctagttcaatgcaagataaggac
tttgcacaagtgaaacctgccgaggaactagtggagaatccagctttcagtttcttgcaa
tag
DBGET
integrated database retrieval system
