Raphanus sativus (radish): 108825562
Help
Entry
108825562 CDS
T06014
Name
(RefSeq) myosin-11
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108825562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108825562
04131 Membrane trafficking [BR:
rsz04131
]
108825562
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108825562
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108825562
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108825562
mRNA cycle factors
P-body specific factors
108825562
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108825562
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108825562
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108825562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
TSC22
nSTAND3
AAA_22
ABC_tran
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
108825562
NCBI-ProteinID:
XP_018454376
UniProt:
A0A6J0L470
LinkDB
All DBs
Position
9:complement(34841124..34849030)
Genome browser
AA seq
1469 aa
AA seq
DB search
MEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHM
MQQYKGAPFGELSPHVFAVADVAYRAMINEGRSNSILVSGESGAGKTETTKMLMRYLAYL
GGRAVTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRT
YLLERSRVCQISDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCFELVGISDA
HDYIATRRAMDIVGISEKEQEAIFRVVAAILHIGNIDFAKGKDVDSSVPKDDKAKFHLNT
VAELLMCDVKELEDALCKRVMVTPEEVIKRSLDPQSAAISRDGLAKTIYQRLFDWLVQKI
NVSIGQDPNSRSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTK
EAIDWSYIEFVDNKDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTNKRFI
KPKLSRTDFTVSHYAGEVQYQSDQFLDKNKDYVIAEHQDLLGASKCPFVVGLFPKLEETS
KSSKFSSIGSRVKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENINIMQQLRCGGVL
EAIRISCAGFPTRKPFFEFVNRFGLLSPEALEGNYEEKAASKKILDNIGLKGYQIGKTKI
FLRAGQMAELDARRALVLSDAAKRIQRRVRTHQARRRFILLREATISLQALCRGRLSSKL
FENLRRQAAAVKIQKNGRRYHSRKAYKSMHVAALVIQTGLRAMAAHKEFRFKKQTKAATT
IQAQWRCHRATSYYKKLKKGVILSQSRWRGRLAKKELRKLKMASRETGALKEAKDILEKK
VEELTYRVQLEKRLRTDLEEEKTQEITKLQSSMEEMRKKVEETNVLLVKEREAAKKAIEE
APPVVTETQVVVEDTQKIESLTEQVEGLKTDLEQEKQRADDAARKFDEAQEFSEERKNKL
EETEKKVQVLQENVTRLEEKCNNLESENKVLRQQAVSIAPNKLLSGRSRSILQRGSASGH
LSVDARPSLDLHSHSINHRDIAEVEDKPQKSLNEKQQENQELLIRCIVQHLGFQGNRPIT
ACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTL
KASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGGADTLRQVEAKYPALLFK
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSVGNSEAQQALIAH
WQGIVKSLTNFLNTLKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
AGLAELEHWCYKATDEYAGSSWDELKHIRQAIGFLVIHQKPQKTLDEISHDLCPVLSIQQ
LYRISTMYWDDKYGTHSVSPDVIANMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKS
MERIEIGDVEPPPLIRENSGFSFLLPCAG
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacctgcaggtggtgtcgatgacatgacaaagctatcatacttacatgagcct
ggtgttcttcagaacttaaagatcagatatgaacttaatgagatttatacatataccgga
aacatccttatagcaatcaatccatttcaacgactgccacacatatatgatgcacatatg
atgcaacaatacaaaggtgcaccatttggagaactaagtcctcatgtttttgcagttgct
gatgttgcatacagggcaatgatcaatgagggaagaagcaattctattcttgtaagtggt
gagagtggagcaggaaaaactgaaaccacaaagatgcttatgagataccttgcttacctg
ggaggtcgtgctgttacagaaggccgaaccgttgagcaacaagttcttgaatcaaatcct
gtccttgaggcctttggtaacgccaaaactgtcaggaataacaattcaagtcggtttggt
aagtttgttgaaatccaatttgataagcaagggagaatatcaggagctgctgtaagaaca
tatcttctagagaggtctcgtgtctgtcagatatctgatcccgagcgcaactaccactgt
ttttatcttctatgtgctgcaccacaagaggaaattgaaaagtacaagttgggtcatcca
aagacgtttcattatctgaatcagtcgaaatgtttcgaactggttggtataagtgatgct
catgattatatcgcgacaagaagagctatggacatagttggaataagcgaaaaggaacag
gaagcaattttcagagtggttgctgcgattcttcacatcggtaacatcgacttcgccaag
ggaaaggatgtggattcatcggttcctaaggacgataaggcgaaatttcatcttaacaca
gttgcagaacttctcatgtgtgatgtaaaggaacttgaagatgcactgtgtaaacgtgta
atggtcacacctgaggaagttatcaagagaagtttagatccacagagtgctgcaatcagc
agagacggtctagctaagacgatttatcagcggctgtttgattggttggtacaaaagata
aacgtctcaattggacaagatcccaattctagatcactcattggagtccttgatatttac
ggattcgaaagctttaaaacaaatagttttgaacagttttgtattaatttcacgaatgag
aagttgcagcaacatttcaatcagcacgttttcaagatggaacaggaggaatacacaaaa
gaagcgatagattggagctacatcgaatttgtggacaataaagatgttcttgatcttatt
gaaaagaaacctggtggaattgtggcacttcttgatgaagcttgtatgtttccgaagtca
acccatgaaacatttgcgaacaagctttatcagacctttaagaccaacaagaggttcatc
aagccaaaactatctcgaacagatttcactgtttcccattatgctggagaagtccagtat
cagtctgatcaatttctagacaaaaacaaagattatgtgattgctgaacatcaagatttg
ttgggtgcttccaagtgtccttttgttgttggactctttcctaagctcgaagaaacatct
aaatcttcaaagttttcttccattggctctcgcgttaagttgcaactccagcaacttatg
gaaacattaaactctactgagcctcactacatcagatgtgtgaagcctaataaccttctg
aagcctgctatatttgagaatatcaacattatgcagcaacttcggtgtggtggtgttttg
gaagcgatcagaatcagttgcgcagggtttcccactcgtaaacctttctttgagttcgtt
aaccgttttggacttctgtctcctgaagctctagaagggaactatgaggagaaggctgca
tctaaaaagattttggacaatattggactcaaaggataccagattggtaaaacaaagata
ttcttaagggcggggcagatggctgaacttgacgcaagaagagctctggttcttagtgat
gctgcaaaaaggattcagagacgagtaaggactcatcaagcccgaagacggttcatttta
ctaagagaagccaccatatctctccaagctttatgcagaggaagactttcttcgaaactg
ttcgaaaacttgagaagacaagctgctgctgtgaagattcagaagaatggtcggagatat
cattctagaaaagcatataaaagtatgcatgtagcggcacttgttatacagactggttta
agagcaatggctgctcataaagagttcagattcaagaagcaaacaaaggctgctacaact
attcaggctcagtggcgttgtcatagggcaacatcttactacaagaagcttaagaaagga
gtgatcctgtcgcagtcacgatggagaggcaggcttgcaaagaaagaacttcgaaagctt
aaaatggcttcgagggaaacaggcgcactgaaagaggcaaaggatatacttgaaaagaaa
gtagaagaactcacataccgtgtgcagttggagaaacgtttaagaaccgacctggaagaa
gaaaagactcaagagataacgaaactgcagagttcgatggaggaaatgaggaagaaagtg
gaggaaacaaatgtgttgcttgttaaagaacgtgaagctgcaaagaaagccatcgaagaa
gcgcctcccgttgtaacagaaacgcaagtagttgttgaagatacacaaaagatcgagtca
ttgacagaacaagttgaaggtctaaagactgatctcgaacaagagaaacaaagggccgat
gatgcagcaagaaagtttgatgaagctcaagaatttagtgaagaaagaaagaataagttg
gaagaaacagagaaaaaagttcaggttctacaagaaaacgtcacaaggctggaggaaaaa
tgcaacaatttggaatcagagaataaagtgttacgacaacaagctgtgtccattgcacca
aataagcttctctctggccggtccaggtctattttacagagaggttcagccagcggtcat
ttatcagttgatgcaaggccaagtttggatctgcatagccattcaataaaccatagagat
atagctgaagtggaggataagccacagaaatcattaaacgagaagcaacaagaaaaccag
gagctgcttatccgctgcatcgttcaacacttgggtttccaagggaaccgaccgatcaca
gcatgtatcatttacaaatgcttattgcaatggcggtcatttgaagttgaaagaaccagt
gtctttgatcggattattcagactataggacatgctattgagacgcaagataacaatgat
atattagcatattggttgtccaatgcatcaacgttgcttttactcctccaacgcacgctt
aaagctagcggtgcagcagggatggctccacaacgccgtcgatcatcttctgccactctc
tttgggaggatgactcagagcttccgtggcgcaccccaaggtgtgaatcttagcttgatt
aacggtggagctgataccttaaggcaagtcgaggctaaatacccggctctgctcttcaag
cagcagctaacagcttatgttgaaaagatatatggaatgattcgtgataacttgaagaaa
gagatttctcctctccttggactgtgcattcaggcaccaagaacatcaagagcaagttta
gtgaaaggagcatctcgttctgttggcaattctgaagcacaacaagcattgatcgcgcat
tggcaaggaatagtaaagagccttacaaacttcctcaatactctcaaatcaaaccatgtt
cctccgttcttggtccgaaaggtgttcacgcagatattctcattcattaatgttcaactg
tttaacagccttttgttaagacgggaatgttgttcatttagtaatggggagtacgtaaaa
gcaggtttggctgaattagagcactggtgttacaaagcaactgatgagtacgcaggttct
tcttgggatgagcttaagcatatcagacaggccatcgggtttctggtgatacaccaaaaa
cctcaaaaaacattggatgagataagtcatgatctgtgcccggtactcagcatacagcag
ctataccgaataagtaccatgtactgggacgataagtacggaactcatagcgtatcgcca
gacgtgatagcaaatatgagggtgctaatgacagaagattcaaacaatgctgttagcaac
tcctttttattggatgatgattccagcattccattctcggttgatgatctgtcaaaatca
atggaaaggattgagattggagatgtagaaccaccacctcttatccgagagaattctggg
tttagctttcttttgccatgtgctggctaa
DBGET
integrated database retrieval system
