Raphanus sativus (radish): 108825691
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Entry
108825691 CDS
T06014
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108825691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108825691
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108825691
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108825691
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108825691
Exosomal proteins of other body fluids (saliva and urine)
108825691
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Fusion_gly
Rv1476
DUF6548
PigL_N
DUF641
T2SSF
DUF6261
Pox_EPC_I2-L1
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
108825691
NCBI-ProteinID:
XP_018454529
UniProt:
A0A6J0L3F0
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All DBs
Position
2:26307398..26310377
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AA seq
303 aa
AA seq
DB search
MNDLLKGSFELPRGESSRQSDVELGEQGGDQGLEDFFKKVQDIDKQYEKLNKLLKKLQAA
HEESKAVTKAPAMKAIKKKMEKDVDEVGSIARFIKGKLEELDRENLANRQKPGCGKGSGV
DRSRTATTLSLKKKFKDKMAEFQVLRENIQQEYREVVDRRIYTVTGERADEDTIDELIET
GNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFMDMAVLVDAQGEM
LDNIESQVSNAVDHVQSGNTALQRAKSLQKSSRKWMCIAIIILLIVVAVIVVGVLKPWQN
KNA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcttcttaagggttcgtttgagcttccacggggagaatcttctagacaaagt
gatgtcgagctaggtgaacaaggaggtgatcaaggtttagaagatttcttcaagaaggtt
caagacattgacaagcaatatgaaaagcttaataagcttcttaagaaacttcaggctgcc
catgaggagtccaaggctgtgaccaaagctcctgccatgaaggcaataaagaagaaaatg
gaaaaagacgttgatgaagtcggaagtattgctcgtttcataaagggcaaactcgaggag
ctagacagagagaacttggcaaatagacaaaaacctgggtgtgggaaagggtctggtgtg
gatcgatcaagaacagcgaccacactttccttaaagaagaagtttaaagacaagatggcc
gagttccaggttctaagagaaaacatccaacaagagtatcgcgaggtggttgacaggcgt
atttatacagtaactggagagcgagcagatgaagatacaattgatgagttgattgaaact
ggaaacagcgaacagatcttccagaaagcgattcaagagcaaggaagaggacaggtgatg
gacacgttggcggaaattcaagaacgtcatgatgctgtcagagacttggaaaagaaactt
cttgacttacaacaaattttcatggacatggcagttttggttgatgcacaaggagaaatg
cttgacaacatagaatctcaggtgtcaaatgcggtagatcacgtgcaatcagggaacacg
gctcttcaaagagcaaagagcttacagaagagctcaagaaaatggatgtgtatcgcaatc
atcatactactcattgttgtcgcagtgatcgttgttggtgtcctcaagccttggcaaaac
aagaatgcttga
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