Raphanus sativus (radish): 108825711
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Entry
108825711 CDS
T06014
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108825711
09123 Folding, sorting and degradation
03018 RNA degradation
108825711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108825711
03041 Spliceosome [BR:
rsz03041
]
108825711
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108825711
mRNA degradation factors
5'-3' decay
Lsm complex
108825711
Spliceosome [BR:
rsz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108825711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
Motif
Other DBs
NCBI-GeneID:
108825711
NCBI-ProteinID:
XP_018454556
UniProt:
A0A6J0L4Q0
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Position
9:complement(32582785..32584331)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGAVESVRDHDDPLKT
TDQTRPLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaaaggaaacagtgttagatttggctaagtttgtggataaaggtgtgcaa
gttaagctcaccggtggtagacaagtcactggaactctcaagggatatgatcagttgctc
aaccttgttctggacggagcagttgagtctgtgcgagatcatgatgatcctttgaagact
accgatcaaacaagacctcttggtttaattgtttgtcgtggaactgcggtgatgcttgtc
tcaccaacggatggcactgaagaaatcgctaacccgtttgttcaaccagaagctgtctaa
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