KEGG   Raphanus sativus (radish): 108826171
Entry
108826171         CDS       T06014                                 
Name
(RefSeq) transcription factor SPEECHLESS
  KO
K20558  transcription factor SPEECHLESS
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    108826171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rsz03000]
    108826171
Transcription factors [BR:rsz03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    108826171
SSDB
Motif
Pfam: HLH bHLH-TF_ACT-like_plant CDC45 DUF5427 Pox_Ag35
Other DBs
NCBI-GeneID: 108826171
NCBI-ProteinID: XP_018455056
UniProt: A0A6J0L665
LinkDB
Position
9:10292810..10296089
AA seq 355 aa
MQESIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISPMAASTPKDGTTSSKELVKNQN
YETSSPKKKRKRLETGKEEEEEEDEEDEDGEGEEEDNKQDGQQKMSHVNVERNRRKQMNE
HLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPS
PRPSPPVLSPRKPPLSPRISHHHLLLPPISPRTPLPTSPYGTHPPQLPLIPQPPRSYSLG
DLPPYSPASSSSSPSVSSNHESSLINELVANSKSALADVEVKFSGANVLLNTVSHKIPGQ
LMKIIAALEDLALEILQVNINTVEETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcaggagtcaataccggattttcttgaagaatgtgaatttgtggacacttcactagcc
ggagatgatctgtttgctatcttagagagtcttgaaggcgctggagagatatctcccatg
gctgcatctacacctaaagatggaaccacaagttccaaagagttagtaaagaatcaaaac
tatgaaacttcatctcctaaaaagaagaggaaaagactagaaactgggaaagaagaagaa
gaagaagaagatgaagaagacgaggatggagaaggagaagaagaagacaataagcaagat
gggcaacaaaagatgtctcatgtaaacgtggaacgtaataggagaaagcaaatgaacgag
catttgaccgttttacgttctcttatgccttgtttctacgtcaaacggggggaccaagca
tcgattataggtggagttgtggaatacataagcgagctacagcaagttcttcaatcttta
gaagccaagaaacaacgtaagacctacgcggaagtcctgagcccgagactagtcccaagc
cctcgtccttcaccgcctgttctaagcccacgaaaaccgcctcttagccctcgtatcagc
caccatcatctccttctccctcccataagccctcgaacccctcttcccacaagcccatac
gggacccatcctccgcaactaccactcatcccacagcctcctcgttcttacagcttaggg
gacctacctccatactccccagcttcatcttcttcctctccttcagtcagtagtaatcat
gagagtagtttgataaatgagcttgttgctaactcaaagtcagctttagctgacgtggaa
gtgaagttctcaggagctaatgtgctgctcaatacggtgtcgcataagatcccaggacag
cttatgaagataatcgctgctcttgaggatttggctctcgagattcttcaggttaacatt
aacaccgtcgaagaaactatgcttaactctttcaccatcaagattggaattgagtgccaa
ctaagtgcagaagaattggctcaacaaattcagcaaacattctgctaa

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