Raphanus sativus (radish): 108826345
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Entry
108826345 CDS
T06014
Name
(RefSeq) actin-interacting protein 1-1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
108826345
Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108826345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
eIF2A
Beta-prop_SCAP
RMC1_N
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
108826345
NCBI-ProteinID:
XP_056850045
UniProt:
A0A9W3CEX1
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Position
9:33132012..33135297
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AA seq
612 aa
AA seq
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MAKLVETFPCVPSTERGRGILISGDPKSDTILYCNGRSVLIRNLQRPQDVEVYGEHGYAA
TVARYSPNGEWIASADVSGTVRVWGTHNGFVLKNEFRVLAGRVDDLQWSSDCLRIVASGD
GKGKSLVRAFAWDSGNTMGDFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKF
HSSHRQHSNFVNCIRYAPDGSKFITVSSDKKGMIYDGKTGDKIGELASEDGHKGSIYAVS
WSPDSKRVLTVSADKSAKIWEISEDGTAGSVIKTLTFTESGGAEDMLVGCLWQNNHLITV
SLGGTMSLYSADDMDKPPLLLSGHLKNVTSLAVLGDNQKTILSCSYDGLIVKWLQGVGYS
CKLQMKDNTKIKRLAATGSNILLTGFDNKVWRMPLTDNGFGDADHVDIGHQPLDISIAID
SPEYTTLVSFESGVVLLNGLNILSKIDLGFVVSASVISPNGKEAIVGGQDGKLHMYSVSE
DNSLKEETVLEKHRGAVTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARI
NSLAWSPNNKMVATGSVDTNVIVYEVDKPASSRITVRHAHLGGVNAVAFVDECTVASSGE
DASVRMWHIEPQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactagtcgagacatttccttgcgttccatccacagaacgaggtcgaggcatt
ttgatctcaggcgaccctaaatcagacaccattctttactgcaacggccgctccgtcttg
atccggaacctccagcgacctcaagacgtcgaagtatacggagagcatggctatgctgct
accgtggcacgttactcacccaacggggagtggatcgcttccgctgatgtctctggtacg
gttcgagtttggggaacacacaacgggttcgtgctgaagaatgagttcagggtccttgct
ggtcgggtcgatgatctccagtggtcctccgattgtcttcggattgtcgcttccggcgat
gggaagggcaagtcgcttgttcgagccttcgcatgggactctggcaacacaatgggagat
tttgatggacattctcgtagggttctaagttgtgccttcaaaccaacgagaccttttcgg
attgctacatgtggggaagatttcttggtcaacttttacgatggaccaccttttaagttt
cactcttctcacaggcaacattcaaactttgtcaactgcatcagatatgcacctgatggt
agtaaattcatcactgtaagctctgataaaaagggtatgatttacgacggtaaaacagga
gacaagattggtgaattagcctcagaagatggtcacaaaggcagcatttatgctgttagc
tggagtccagacagcaaacgggtgcttactgtctctgctgataagtctgccaagatatgg
gagatatctgaagatggaactgctggttctgtaataaagacattaacgtttacagaatct
ggtggagcagaagacatgcttgtgggatgtctttggcaaaacaatcatctcattacagtg
tctcttggcggtaccatgtccttgtactctgcagatgatatggataagcctccattgttg
ttatctggacatttaaagaacgtcacttctttggctgttcttggggataaccagaagacg
attctgtcttgtagctatgatggtcttatagtcaaatggttacaaggagttggttacagt
tgcaagttacaaatgaaagataacaccaagatcaagagactagcagctactggatctaac
attctcttaaccggttttgataacaaggtctggagaatgcctttaactgacaacggattc
ggggatgcagatcatgttgatataggccatcaacctttggacataagcatagctattgat
tcaccagagtacacaacactagtctcttttgagtctggagttgtgttgctcaatggtctg
aacattttgagcaagatcgatcttggttttgtggtgtcagcctctgtgatctcacctaac
ggtaaagaagctattgtaggaggacaagacggtaagctacacatgtactcagtctcagaa
gacaatagcctcaaagaagaaactgtgttggagaaacatagaggtgctgtgacagtgata
cgctactctcctgatttaacaatgtttgcttctggtgacgccaaccgcgaagctgttgtc
tgggatcgcgagaccaaacaggtgaagctaaacaacatgttgttccacactgctcgtata
aacagtttggcatggtcaccaaacaacaagatggtagctactgggtctgtagacactaac
gtcattgtatatgaagtggacaagccagcttcgagtcgcataaccgtaagacacgctcat
ctcggtggagttaacgcagtcgcctttgttgatgagtgcaccgtagcaagttccggtgaa
gatgcttcggttcgtatgtggcatattgagcctcaatga
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