Raphanus sativus (radish): 108826664
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Entry
108826664 CDS
T06014
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108826664
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108826664
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108826664
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
108826664
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108826664
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108826664
Prokaryotic type
108826664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108826664
NCBI-ProteinID:
XP_056849680
UniProt:
A0A9W3CDS2
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All DBs
Position
9:complement(7030775..7033553)
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AA seq
684 aa
AA seq
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MMTHEIPPPTDQLTAFSLSNDEEASSSTTLSRPDSGAELTDQKIQSHRWVRTGTTEQGKE
TFSITVVNGGSSSSANLQVMFDDSSVPNLSELAAVTIDDVDGCLKIPLHGKGTKYKIQLS
VEKVTDDEETPPPSDQLAAVSSRHVPVKSILCRPDGGAGLAGQKVRIFGWVRTGRLQGKG
TFAFLEVNDGSCPAFLQVIVDASLSTDLSKLIAKGTCVVVDGCLKLPPQGTKQKIELKVE
EVVAVGTVDQATYPFPKNKPSLEHLRKYLHLRARTNSIASVARIRSALAFATHSFFQSQS
FLYVNTPIITTSDCEGAGEMFQVTTLISSTEKLERDLLQNPPPTEADVEAARLVVKERGE
AVATLKAAKAASEQEITASLAELANAKLSLARTVERSRLKPGLPKKDGGVDYSQDFFGRQ
AFLSVSGQLQLESYACALGSVYTFGPTFRAENSHTSRHLAEFWMVEPELALADLEEDMDC
AEEYVRYMCKWLLDNCYDDLEVMAKNVDEGCIERLKLVASTPFVRVTYTDAIELLKKAVA
QRQKFENYVEWGIDLASEHERYLTEVVFQKPVIVYNYPKGIKAFYMRVNDDGKTVAAMDV
LVPKVGELIGGSQREERYGVLMSRLEEMGLPVEPYEWYLDLRRHGTVKHSGFGLGFERMV
LFATGMDNIRDVIPFPRYPGRADL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcatgagattccgccaccgacagatcaactaaccgccttctccttgagcaac
gatgaagaagcctcctcttcgacgaccttgtctcgacccgacagcggagcagaacttacc
gaccagaagatccaaagccacagatgggtcagaaccggaacaacagagcaaggaaaagaa
actttctctatcactgtggtgaacggtggatcctcctcctctgcgaatcttcaagttatg
tttgatgactcttctgttccaaatctctcagagctggctgctgttaccatcgacgacgtc
gatggatgtctgaagattcccctacacggtaaaggcaccaagtacaagattcagcttagc
gttgagaaggtgactgatgacgaagagactccgccgccatcagatcaactcgctgccgta
tcttcacgtcacgtgcctgttaaatccatcttgtgtcgacccgacgggggagcagggcta
gccgggcagaaagtccggatcttcgggtgggttagaaccggaaggttacaaggaaaaggt
actttcgctttcctcgaggtgaacgacggatcatgcccagcgtttctccaggttatagtg
gacgcttctttaagtacagatctctccaagttgattgctaaaggaacttgtgtagtcgtt
gatggatgtttgaagcttcctccgcaaggcacaaagcagaagattgagcttaaggtcgag
gaggtggttgctgtgggaacggtggatcaggctacgtacccgtttcctaagaacaagccc
tccctagagcatttgagaaagtatcttcaccttcgcgccagaaccaactcgatagcttca
gttgcaagaatcagaagcgcgcttgcttttgcgacacactctttctttcagtcacagagt
ttcctttacgttaacacaccaatcatcaccacaagtgactgcgaaggagctggtgagatg
ttccaagtgacgacactgatcagttcaaccgagaagcttgagagggatcttctccagaac
cctccacctaccgaggctgacgttgaagctgctaggctcgttgttaaagagagaggtgaa
gctgtagcgaccctgaaagctgctaaagctgcaagcgagcaagagatcactgcgtctctt
gctgaactcgctaatgcaaagctgagtttagctaggactgtagagaggtcaaggctcaag
cctggcttacctaaaaaagatgggggagtcgattattctcaagactttttcggtcgtcaa
gctttcttgtctgtttctggtcagttacagcttgagagctacgcttgtgctcttggcagc
gtgtacacctttggccctacttttagagcggagaactctcatacctcgaggcatcttgct
gagttctggatggttgagcctgagttagctttagcagacctagaggaggatatggactgt
gcagaagaatatgtgagatacatgtgcaagtggctgcttgataactgctacgatgacttg
gaagttatggccaagaacgttgacgagggatgcattgagaggctaaagctggttgcatca
actccgtttgtgcgtgtaacgtacactgatgcaatagagttgcttaagaaagctgtggct
caaagacagaaatttgagaactatgtggagtggggaatagacttggcgtctgagcatgaa
agatacttgacagaggttgtgtttcaaaagcctgttattgtctataactacccgaaagga
atcaaagctttctatatgagagttaatgatgatggaaagacagtcgctgctatggatgtc
ctcgttccaaaggttggagagctcattggtgggagccaaagagaagaacggtatggcgtc
cttatgagcaggctcgaggagatgggtctaccagtggagccatacgagtggtacctggac
ttgagacgtcatggaacagtgaagcattcaggattcggacttgggttcgagcgtatggtt
ctgtttgctacaggaatggacaacatcagagacgttattcctttccctcgctatcccgga
agagctgatctttga
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