Raphanus sativus (radish): 108827019
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Entry
108827019 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108827019
KO
K03504
DNA polymerase delta subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
rsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108827019
03410 Base excision repair
108827019
03420 Nucleotide excision repair
108827019
03430 Mismatch repair
108827019
03440 Homologous recombination
108827019
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108827019
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108827019
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108827019
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108827019
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108827019
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108827019
MMR (mismatch excision repair)
DNA polymerase delta complex
108827019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
108827019
NCBI-ProteinID:
XP_018455866
UniProt:
A0A6J0L8P1
LinkDB
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Position
9:complement(1261410..1264179)
Genome browser
AA seq
490 aa
AA seq
DB search
MTQTETLNILDELSSLVSDQLQVVSYKWLSRNFSLSSITAKRLLKDFVEKNGKGLEVVYI
VSGWLKNTPSDHRTRLVSSSKLSEVEKEFNGTHSVSIYSVQASIPMEPAAIWNSEFVQAE
ELFLQPSTTDNCLRDNRFCGISNSFIKRNIEGGTANVTAPGTASVGTTVQPKSGLNRQES
TVPSIPKVGHQAPAQKQTVKSSNDKEKSLPVPANKKIGQAQKSVAGTGGSLKNMWGRVPV
KTEDDSVKNNDTSEAQKPSHNDKSKGGSDDEAPDVSIRNRKRKVIFDFSDEECEDVISLA
SPSSHKISPRPDGEEIKEDSGTEKPDERVSRETETDKPEVSEQDCQKTTSAGTSGVKKEE
KPMASSKEKKIQAIGSEAGVNPSKGRMSNAPSSPKRKKVLKTRIDERGREVTEVVWEETE
TNATKKEDTDTSKKLNDGKSANAAVNRAVVQKKSPAMGAGNAGGKAGSKKGGNVKDPKQG
NIMSFFKKKV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaccgaaaccctaaatatcctcgacgagctctcgtctctcgtctccgatcag
cttcaagtggtatcttacaaatggctgagtcgtaatttctctctttcatcaataactgcc
aagaggctgcttaaggatttcgtggagaaaaatgggaaaggtctggaagttgtatatatt
gtgtctgggtggctaaagaacacaccttccgatcaccgcacaaggcttgtatctagttcc
aaactttcagaagtggagaaagagttcaatggaactcattcagtttctatatacagtgtt
caagctagtattccaatggagccagcagccatatggaacagtgagtttgttcaagcagaa
gaactcttcttgcagccttctaccactgataattgcttgagagacaacaggttttgtgga
atctccaattcttttataaagcgtaatatagagggaggcactgcaaatgttacagccccg
ggaactgcaagtgtgggaactactgtacaaccgaaaagtggtttaaatcgtcaagagtct
acagtgccttcaatccccaaggttggccatcaggctccagctcaaaaacaaactgtgaaa
tcctccaatgataaagaaaagtcccttcctgtgcccgctaataaaaagatcggacaggcc
caaaagagcgtggctggaactgggggttcgttgaaaaatatgtggggccgtgtacctgtg
aaaacagaagatgattctgtcaaaaacaacgatacctcagaagctcaaaagccttctcac
aatgacaagagcaagggaggcagcgatgatgaggccccagatgtcagtatcaggaacaga
aaaaggaaggtgatatttgacttttctgatgaagagtgtgaagatgttatcagcttagca
tctcctagtagtcataagattagtccacgtccagatggcgaagaaatcaaagaagattcg
ggtacggagaagcctgatgaacgtgtatctcgagagaccgaaacagataaaccagaggtc
agcgaacaagactgtcaaaaaactacctctgctggtacttcgggtgtcaaaaaagaggag
aaacctatggcttcatcaaaggagaagaagatccaggccattggttctgaagctggagtc
aatccctcaaagggaagaatgagtaatgctcctagttcaccgaaaaggaaaaaagtgttg
aagacgcggattgatgagcgtgggagagaagtaactgaggtggtctgggaggaaacagaa
acaaacgcaacgaagaaagaagatactgatacaagtaagaagttaaatgatggcaaaagc
gcaaacgctgctgttaacagggcggttgtgcagaagaagagcccggccatgggagcagga
aacgcaggaggaaaagcaggaagcaagaaaggagggaacgtgaaagatccaaagcaaggg
aacataatgtctttcttcaagaagaaagtctaa
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