Raphanus sativus (radish): 108827055
Help
Entry
108827055 CDS
T06014
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00541
Biosynthesis of various nucleotide sugars
rsz01100
Metabolic pathways
rsz01250
Biosynthesis of nucleotide sugars
Module
rsz_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
108827055
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
108827055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
108827055
NCBI-ProteinID:
XP_018455904
UniProt:
A0A6J0L8L1
LinkDB
All DBs
Position
9:complement(1300084..1302566)
Genome browser
AA seq
669 aa
AA seq
DB search
MASPYTPKNILITGAAGFIASHVANRLIRTYPHYKVVVLDKLDYCSNLKNLNPSKNSPNF
KFVKGDIASADLVNHLLVTERIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
VTAGQVKRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG
LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGSNVRSYLYCEDVAEAFEVI
LHKGEVGHVYNIGTKKERRVNDVARDVCKLFGVDPEKSIKFVENRPFNDQRYFLDDEKLK
KLGWSERTTWEEGLRKTKEWYTQNPEWWGDVSGALLPHPRMLMMPGGRGHFDGSEESSLV
TDEKPSQRNHMVVPSLRSAPQKLSLKFLIYGKTGWIGGLLGKICEKQGIAYEYGKGRLED
RASLLQDVVSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCRENGLLM
MNFATGCIFEYDENHPEGSGVGFKEEDTPNFTGSFYSKTKAMVEELLKEFDNVCTLRVRM
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS
HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK
YAFEPNKKT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccgtacacgcccaagaacatactcatcaccggagcagccggtttcatcgcc
tcccacgtggcgaacaggctaatccgaacctaccctcactacaaggtcgtcgtcctcgac
aagctcgactactgctccaacctcaagaacctcaacccttcaaaaaactccccgaacttc
aagttcgtgaaaggagacatcgccagcgccgacctcgtcaaccacctcctcgtcaccgaa
cgcatcgacaccatcatgcacttcgccgcccagacccacgtcgacaactccttcggcaac
tccttcgagttcaccaagaacaacatctacggcacccacgtcctcctcgaggcctgcaag
gtcacggccgggcaggtcaagaggtttatccacgtcagcacagacgaggtttacggggag
actgatgaggacgcgctcgtggggaaccacgaggcgtcccagcttctccccaccaaccct
tactccgcgaccaaggcgggcgcggagatgcttgtgatggcgtatgggaggtcttacggc
ctcccagtgatcaccactcgtgggaacaatgtctacgggccgaatcagtttcccgagaag
ctgattcccaagtttattttgctggcgatgagagggaaggtgctgccgattcatggggat
ggttccaacgtgaggagttatctttactgcgaggacgtggctgaggcctttgaggtgatt
ctccataaaggagaggtggggcatgtttataacattgggactaagaaggagaggagagtg
aacgacgtggcgagagatgtttgcaagctctttggggtggaccctgagaagagtattaag
ttcgttgagaacaggccttttaatgatcagaggtattttcttgatgacgagaagctgaag
aagctggggtggtctgagaggacgacgtgggaggaagggttgaggaagactaaggagtgg
tacactcagaaccctgagtggtggggtgatgtctctggagcgttgcttcctcatcccagg
atgctgatgatgcctggagggagaggacacttcgatggttccgaggagagttctttagta
actgatgagaagccgagtcagaggaaccacatggtggttccaagcctaaggagcgcaccg
cagaagctttctctcaagttcttgatttacgggaagacgggatggatcggtggtttgctt
gggaagatatgtgagaagcaagggattgcttacgagtatgggaaggggaggttggaggat
agagcgtctcttctgcaggatgttgtgagtgttaagccgactcatgttttcaactcggct
ggtgtgactgggagacctaacgttgactggtgtgagtctcacaagacggagactatccgt
gccaacgtggctgggactttgactctagctgatgtctgcagagagaatggtcttctcatg
atgaacttcgctaccggttgtatattcgagtatgatgagaaccatcccgaaggttcaggg
gttgggttcaaggaggaagacactcccaacttcactggctccttctactcaaaaaccaaa
gccatggtggaggagctgctcaaggagtttgacaacgtgtgcacgttacgagtgaggatg
cctatctcttcggatctaaacaacccacgcaacttcatcaccaagatctctaggtacaac
aaagtagtgaacattccgaacagcatgactgtgcttgacgagcttttaccgatctccata
gagatggcgaagaggaacttgagagggatatggaacttcacgaaccccggggtggtgagt
cacaacgagatcctggagatgtacagagactacatcaacccggagttcaaatgggcgaac
ttcacgttggaggagcaagctaaagtcattgtggctccgagaagtaacaacgagatggat
gcttctaagttgaagaaagagttccctgagctactctccatcaaggagtctttgatcaag
tatgcgtttgaaccaaacaagaagacttag
DBGET
integrated database retrieval system
