Raphanus sativus (radish): 108827105
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Entry
108827105 CDS
T06014
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108827105
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108827105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
108827105
NCBI-ProteinID:
XP_018455961
UniProt:
A0A6J0L8X5
LinkDB
All DBs
Position
9:complement(32819620..32823427)
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AA seq
758 aa
AA seq
DB search
MKRDFDEISEEEWSQHSFNASRVLKQPRAPKPTRNTTPRQPNPPPPIESFAYRRPSKAIV
SIVSSDEDDCVVVEDSDVKIVNGGDDLLLDDDEEEVVVRRARVGRRFVIEDEEASEEEEE
EDEVEEVSSSEEDEGGEGGDGDEDVVGKALQKCAKISADLRKELYGSSSGVTTCDRYSEV
ESSTVRIVTQTDIDEACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGK
TIQAITYLTLLNHLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAARAAYSRE
LNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYR
WKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDTELI
TRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVHMERKQEDTYKEAIEEYRAASQARVLK
LSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFE
CSLERVIEEVKSYNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRILAELLPSMKKSGN
RVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRA
GGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIA
KRKLVLDAAVLESGVHVDDNGDTPEKTMGEILASLLMG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgatttcgacgaaatctccgaggaggagtggtcgcagcactcgttcaacgct
tcgcgagttctcaaacagccacgtgctcccaagccaacgaggaatacgactcctcgtcag
ccgaatcctccgcctccgattgagtccttcgcctacaggaggccgtcgaaggcgattgtg
agtattgtcagcagcgacgaggacgattgcgtcgtggtggaggattcggatgtgaagatt
gtgaacggaggagatgatttgttgctggatgatgatgaggaggaagtggtggtgcgacgt
gcgcgagtcggtaggaggtttgtgattgaagatgaggaagcgagtgaggaggaggaggag
gaggatgaggttgaggaggttagttctagtgaagaagacgaaggtggtgaaggaggagac
ggagatgaggatgttgttgggaaggcgttgcagaagtgtgctaagatctcggcggatctt
aggaaggagctttacggtagctcttctggtgttactacttgtgataggtactctgaagtg
gagtcttctactgtgaggattgtcactcagactgatattgatgaagcctgtaaagcagag
gattctgattttcagcctatactcaagccctaccagttagttggtgttaattttcttctt
ttattgtataagaagggaattgaaggagccattctagccgatgagatgggtcttggaaag
actatacaggcaatcacgtatttaactctcctaaatcacttgaacaatgaccctggtcct
catttggttgtatgccctgcctctgtcctggaaaactgggagagagagctcagaaagtgg
tgtccatcgtttactgtacttcagtatcacggagcagcgagagcagcctactctagagaa
ttgaattctctgtcaaaagctgggaagccgccaccattcaatgtacttcttgtgtgttat
tctttgtttgagcgacatagtgaacaacagaaagatgaccggaaggtattgaaacggtgg
cgttggagctgtgttttgatggatgaagcccatgctttaaaggataagaacagttatagg
tggaaaaacctgatgtccgtggccagaaacgctaaccagcgtcttatgcttacaggaaca
cctctacaaaatgatttgcatgaactatggtcgctgctggagttcatgttgcctgatata
tttactacagagaatgttgacttgaagaagctgttgaacgcagaagataccgagctgatt
actcgaatgaaatctattcttggccctttcatcttgaggcgtttgaaatctgatgtcatg
cagcaacttgttccaaagatacagcgggttgagtatgtccatatggagagaaaacaggaa
gacacatataaggaagccatagaggaatatcgtgctgcttctcaagcgagggttttgaag
ctatcatcaaaatccttgaattccttagccaaggcacttccaaagcgtcaaatttcaaac
tattttactcaatttcggaagattgcgaatcatccattgttaattaggagaatatacagc
gatgaagatgtcattcgcatcgcgaggaagttacacccaattggtgcatttggatttgag
tgctccttggaaagagtcattgaagaagttaagagttacaatgacttccgtatacaccag
cttttgttccaatatggagtcaacgacaccaaaggaactctctcagacaaacatgttatg
ctctcagcaaaatgtcggatattagcggagcttcttccttcaatgaagaaatcaggcaat
cgtgttctaatattcagtcagtggacatcgatgctcgatatcttagagtggacactcgat
gttataggcgttacataccgaagacttgatggcagtactcaagtcacagatagacaaact
atagtcgacacattcaacaacgataagtcgatatttgcttgtctgttgtcaactcgagca
ggcggacaaggtctgaatttaacgggagcagatacagtgattattcacgatatggatttt
aatccacagattgatcggcaagctgaagatcgatgccatcgtatcggtcaaaccaaacca
gtcactatcttcagactggtgacgaagtcaacggtggatgagaacatctacgagatagca
aagaggaaacttgtacttgatgcggcggttttagagtcgggagttcacgtagatgacaac
ggagacacgccggagaaaaccatgggagagattctcgcttctcttctcatgggataa
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