Raphanus sativus (radish): 108827106
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Entry
108827106 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108827106
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108827106
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
108827106
NCBI-ProteinID:
XP_056851131
UniProt:
A0A9W3CHQ8
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Position
9:32829443..32833852
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AA seq
558 aa
AA seq
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MTEMDLTYIYFSRSTYAILNKIEEEQKTRERSERERERERKGFEIFPYTQRRRSTKMASS
SSYNASVVPSSSSSVQPLFLTGSGVGESDFDQKDTFMSIIQQPNSSAPPPKKRRNQPGNP
NPDAEVVALSPKTIMATNRFICDVCKKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKV
YLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT
KEYRCDCGTIFSRRDSYITHRAFCDALIQETGRNPTMSFTSIAAASSGAGSGVFYGRLDG
GRTLSHHHLSDHPNSGFPPLAGYNLNMASSENSRHFVPQTSNPNFLIQSSQGMLTLPNNS
DQSFMNQQGLNQFDPLNNINSKSSTNNSFFNLGFFQENTKNSETSLPSLYRSDVLVHHPG
ESLNVGSNVSATALLQKATQMGSITSNDPSALFRGLASSSSNDFGEGQIMGNDNNGNLQG
LMNSLVAANGGGAGGSGGNIFDVHFGNNANMSGSDKLTLDFLGVGGMVRNVNRGRGRGDV
SLDGDLKFSEQNHPFGRS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatggaccttacctacatatacttttcaagatccacatatgccatattaaac
aaaattgaagaagaacaaaaaacaagagagagatcagagagagagagagagagagagaga
aagggctttgagatatttccttacacacaaagaagaagatctactaagatggcgtcatca
tcatcatataacgcaagcgttgttccttcatcatcctcctcggttcagccgctcttcctc
actggctccggcgtcggagagagcgactttgaccagaaagatacttttatgtcaataatt
cagcaacctaactcctcagctccaccacccaagaaacgaagaaaccaacccggaaaccca
aatcctgatgcggaagtggtagctttatctccaaagacaataatggctacaaacaggttc
atatgcgatgtatgcaagaaagggtttcaaagagaacaaaacctacagctacaccgaaga
ggacacaatctcccttggaagctcaaacagaagtcaaccaaagaagtgaagaggaaagtg
tatctttgtccggaacccacgtgcgtccaccatgacccctcacgtgctctcggagacctc
accggaatcaaaaagcactattaccgtaaacatggagaaaagaagtggaagtgcgagaaa
tgctctaagcgttacgctgttcaatcggattggaaagctcactctaagacgtgtggtact
aaagagtatcgatgtgactgtggtaccatcttctctagacgcgatagttacattacacac
agggctttctgtgatgcattgatacaagagactggtagaaaccctaccatgagcttcacc
tcaatagcagctgctagcagcggcgccggctccggtgtattttacgggagactcgacggt
ggcaggactctatcacaccaccatttgagtgaccatccaaactctggatttccgcctctc
gcgggttacaacctaaacatggcatcttctgaaaatagcagacactttgttccgcaaacg
tcaaaccctaacttcttaatccaatcgagccaaggaatgctgactttaccgaacaacagc
gatcagagtttcatgaaccaacaaggtctaaaccagtttgatccactcaacaacataaac
tccaagagtagcaccaacaacagcttcttcaacctcggattctttcaagaaaataccaag
aactcagagacgagtcttccttctctatataggtccgacgttcttgttcatcaccctgga
gaaagcttgaacgtgggttctaacgtgtcagccacggcactgcttcagaaagctactcaa
atgggttccatcacaagcaacgatccctctgctttattcagagggttagcttcttcgtca
agtaatgattttggagaagggcagattatggggaacgataataacggtaatctccaaggt
ctaatgaactcactagtggcagcaaatggcggtggcgccggcggatccggtggcaatata
tttgatgttcatttcggaaacaatgcaaatatgagtggctcggacaagttaacgttagat
tttcttggagttggaggaatggttagaaatgtaaatcgcggtcgtggtcgtggcgacgtt
tctttggatggtgacctgaagttttcggagcaaaatcatccatttggaagatcttga
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