Raphanus sativus (radish): 108827165
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Entry
108827165 CDS
T06014
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5 isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108827165
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108827165
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108827165
NCBI-ProteinID:
XP_018456017
UniProt:
A0A6J0L794
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All DBs
Position
9:complement(32931834..32934747)
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AA seq
459 aa
AA seq
DB search
MRTDQGAVLMLDDDASNKNTSNPCCVVSSSSSDPFLTSSENGVATTTTSTQKRKRRPAGT
PDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKK
RVYVCPEPTCLHHAPCHALGDLVGIKKHFRRKHSNHKQWTCEKCSKGYAVQSDYKAHLKT
CGTRGHSCDCGRVFSRVESFIEHQDNCSVRKVNREPLPPKTAVIVQACSSRTASTASTPS
SEANYRGAVAVATPIPLEGRPIHMRNSSILTNSSSLNLELQLLPLTSNQNPNQENHQHRV
NEPSHYHHHDTTNLDLSIAPSSSSSSYHHHYNNFDRIKEIMASEHMMKIALKEKAYAEEA
KREAKRQREMAENEFMNAKKIRQQAQAELERAKLLKEQSMKKISSTIMQVTCQTCKGQFQ
AVDIPAAVADETSLVVSYMSSANTDGEGPTIEFEKGFKY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagatcaaggagcagtactgatgttggatgatgatgcttccaacaagaacact
agtaacccatgttgtgtggtttcttcttcttcttctgatcctttcctcacttcttctgaa
aatggggtcgccaccacaaccacatccactcagaagagaaaaagaagaccagcaggcaca
ccagatccagatgcagaagttgtgtctttatcaccaagaactcttcttgaatcagacaga
tacatatgtgagatatgtaaccaagggttccaaagagatcaaaatctccagatgcatcga
agacgtcataaggttccatggaaacttctaaagagagacaacaacatagaagtgaagaaa
cgggtctatgtttgccctgaacccacttgtcttcaccacgctccatgtcatgctcttggt
gatcttgtaggaatcaaaaaacatttcagacgaaagcacagtaaccataagcaatggact
tgtgagaaatgctctaaaggttatgctgttcaatcagattacaaagctcatctcaaaact
tgtggcactaggggccattcttgtgactgtggtcgcgtcttctccagggtggagagtttt
attgaacatcaagataactgttccgtacgaaaggttaatcgtgaaccgctgccgccaaaa
accgccgttattgtccaggcttgctcttccagaaccgcctcaaccgcaagcactccatct
agcgaagcgaactatcgcggtgcggttgcggttgcgactcctatacctctagaagggcgt
ccaattcatatgagaaactcatctattctcaccaactcatcgagtctcaaccttgaactc
cagcttcttccattaacgtcgaatcaaaaccctaatcaagaaaaccatcaacacagagtt
aatgaaccatctcactaccatcatcatgataccacaaacttagacctatccattgctcca
tcatcatcatcatcatcatatcatcatcactacaacaactttgatcgcataaaagaaata
atggcgagcgaacatatgatgaagatagctttgaaagagaaagcttacgcggaggaagct
aaaagagaagcaaagaggcaacgagagatggcggaaaacgagtttatgaatgctaagaag
ataaggcaacaagcacaagctgaacttgagagagctaagcttttaaaggaacaatctatg
aagaagataagttcaacgattatgcaagttacttgtcaaacttgtaaaggacagtttcaa
gctgttgacattcccgcggcggtggcagacgagacatctcttgtggtgagttacatgtca
tcggcgaataccgacggagagggaccaaccatagagtttgaaaaagggtttaaatattaa
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