Raphanus sativus (radish): 108827175
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Entry
108827175 CDS
T06014
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 39
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108827175
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108827175
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Motif
Pfam:
Pectinesterase
PMEI
Pectate_lyase_3
TrfA
ArgoL1
Motif
Other DBs
NCBI-GeneID:
108827175
NCBI-ProteinID:
XP_018456028
UniProt:
A0A6J0L838
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Position
9:23069578..23072144
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AA seq
521 aa
AA seq
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MHNPSRKTSDHINLNILALTFHLIFLISTVHSQSTQRLAEHNNITELIVATLNQTILNVN
VSYTTFYNLHKRLGPNIAHRYHCAFEDCLGLLDDTIFDLETAISKLQTSSLGAHDVNMLL
SDAMTNQDTCLEGFTTSGIHENNNDNTYKLTDSLKDSILEISSNLSNSLRMLQTIPGHEH
SPEAFEVDVEFPSWVLEDDKRRLHAPVEKTKFDLMVAKDGTGNFFTINDAVSAAPNSSVT
RFLIYIKRGVYFENVEIPKKKTMIMFVGDGIGRTVIKANRRNGILKTFQTATVGVKSEGF
IAKDISFVNFAGPSPQAVALRSSSDHSAFYRCSFEGYQDTLYVYSGKQFYRECDIYGTVD
FVFGNAAVVFQNCSLYARKPNPGQKITYTAQSRNVSYDPTGISMINCRFLAAADLIPVKG
SFEAYLGRPWKNFSRTIIMKSFIDDLVVPAGWLEWNTTVSLENLYYGEYMNYGPGSSTTN
RVHWPGYKRINATEATQFTVGPFINGGTWLNSTGIPFNTGF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcataatccaagtagaaaaacgtcggaccacataaatctcaacatactagcattgacc
tttcacctaatcttcttaatatccaccgttcattcacaatccacgcagcgtctagccgaa
cacaataacatcactgagctcatcgtcgctactttaaaccaaaccatcttaaacgtcaat
gtctcttacactaccttctacaacctccataaacgtcttggtccaaacatagctcaccgt
taccactgcgcattcgaagactgtctcggtctactcgatgacactatcttcgatcttgaa
actgcaatctccaagctccaaacttcctctcttggggcccacgacgttaatatgttgctc
agcgacgctatgacgaatcaagacacgtgtcttgagggtttcacgacaagtggaattcat
gaaaataataatgataacacgtataaattgacggatagcttgaaggatagcatcttggag
atctctagcaacctcagtaactctctgcgcatgctgcagacaattccagggcatgaacac
tccccggaagcatttgaggttgacgttgagttcccgagttgggtcttagaggatgacaag
agacgacttcacgctccggtggaaaaaactaagtttgatctcatggtggctaaagacggt
accggaaacttcttcaccatcaacgatgcggtctcggccgctcctaactcgagtgtaaca
aggtttttgatatatataaaacgtggggtatactttgagaacgtcgagataccgaagaag
aagacaatgataatgtttgtgggagacggtatcggaagaacagtcataaaagcaaaccgc
aggaatggtatcttgaaaacatttcaaactgctaccgtaggcgtgaaaagtgaagggttc
atagctaaggatatatcattcgtgaattttgctggaccgtcaccacaagccgtggcattg
cgaagcagctctgaccactctgctttctaccgttgctctttcgaaggctaccaagacacc
ctttatgtctattcaggcaaacagttctatagagaatgtgatatatatggtacggtcgat
ttcgtattcggtaacgcggctgttgtgttccaaaactgtagtctttatgctcgtaaacca
aaccctgggcagaaaatcacatacactgctcaaagccgcaatgtatcgtacgatcctaca
ggtatctctatgattaactgtagattcttggccgcggctgatttgatccctgtaaaagga
agcttcgaggcgtacttaggtcgaccgtggaaaaacttctctaggacgatcatcatgaaa
tcgtttattgacgatctggttgttcctgccggatggttggagtggaatacaactgttagt
ctcgaaaacctatattatggagagtacatgaattatggacctggttcgagcacgacaaac
cgggtccattggcctggctataaacgcatcaacgcaacggaagcaacccaattcacagtt
ggtccatttattaatggtgggacgtggcttaattcaaccggcatcccatttaatactggt
ttttaa
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