Raphanus sativus (radish): 108827184
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Entry
108827184 CDS
T06014
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108827184
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108827184
NCBI-ProteinID:
XP_018456043
UniProt:
A0A6J0L853
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Position
9:complement(24872479..24874878)
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AA seq
590 aa
AA seq
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MAVDSSLSSPLGPPACEKDAKALRFIEEMTRNADTVQENLLAEILRRNAETEYLRRFKLG
GATDRDTFKSKLPIITYEDLQPEIQRIADGDRSPILSAHPISEFLTSSGTSAGERKLMPT
IQEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLPARPVLTSYYKSD
KFRSRPYDPYNVYTSPNEAILCPDSFQSMYSQMLCGLLDRLSVLRVGAVFASGLLRAIRF
LQLHWSRLANDIESGSLDSEITDPSIRQCMSDILKPDQKLAEFIRRECETENWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLNPMSKPSEVSYTI
MPNMAYFEFIPLGGSKAVELVDVKIGKEYELVVTTYAGLCRYRVGDILRVTGFHNSAPQF
HFVRRKNVLLSIDSDKTDESELQKAVENASKLLLKECGTRVAEYTSYADTSTIPGHYVLY
WELLVREGERQPSHDTLARCCLEMEESLNSVYRQCRVADNSVGPLEIRVVRNGTFEELMD
YAISRGASINQYKVPRCVNFTPIVELLDSRVVSAHFSPALPHWTPERRRR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagactctagcctctcgtcgccgttgggacctccagcgtgtgaaaaagacgca
aaagccctccgtttcatcgaggaaatgactcgaaatgcagatacggttcaggaaaacctc
ctagcggagattcttagacgcaacgctgagacggagtacctccgtcgcttcaaacttgga
ggtgccacagaccgtgatacctttaaatcaaagcttccaatcattacctacgaagatctc
cagcccgagattcaacgtatcgctgacggagaccgatctcccatcttatccgcccatccc
atctccgagttcctcaccagttccggaacctcagccggagagaggaaactcatgcccacc
attcaagaagagctcgaccgtcgccagcttctttatagtctcctcatgcccgtcatgaat
ttgtatgtgccaggactagataaaggaaagggattgtacttcctattcgttaagtccgaa
acaaagacacctggcgggctaccggctcgacctgtcttaaccagctactacaagagtgat
aaattcaggtcccgaccatacgatccttacaacgtgtacaccagtcccaacgaagccatt
ctctgtcccgactccttccagagcatgtactctcagatgctatgcggcctccttgaccgc
ctctctgtcctccgagttggcgccgtttttgcctccggtctcctccgcgccatccgattc
ctccagcttcattggtctcgcttggccaacgacattgagtcaggctctctcgactccgag
ataaccgacccgtctataaggcagtgcatgtccgatattctcaaaccggaccagaaacta
gccgagttcatccggcgggagtgcgagaccgaaaattgggaaggaatcatcacccggatt
tggcccaacactaagtaccttgatgtcatcgtaaccggagccatggctcaatacatccca
acgttggagtattatagcggtggccttccgatggcttgcacaatgtacgcttcctccgag
tgttactttggtttaaaccttaacccgatgagcaaaccatctgaagtttcgtacaccatc
atgcccaacatggcctacttcgagtttatccctcttggcggctccaaggccgtcgagctt
gttgatgtaaagatcggcaaagagtacgaactcgtcgtcacgacctacgccggtctatgt
cgataccgagttggtgacatcctcagagtcacgggcttccacaactcagcacctcagttt
catttcgtgaggaggaagaacgtcctcctcagcatcgactccgacaagaccgacgaatct
gagctccagaaggccgtggagaacgcatcgaagctgcttctcaaagagtgcggcacacgt
gtcgcggagtacactagctacgcagacacgagcacgatcccgggacactacgttttgtac
tgggagttgttagtgagggagggagagaggcaaccgagtcatgatacgctggctcgatgc
tgcctcgagatggaagagtcgttgaactcggtttaccggcaatgtcgagtcgctgacaac
tcggttggaccgttggagattagggtggtaagaaacggaacgttcgaggagttgatggac
tatgccatctcaagaggtgcgtcgataaaccagtacaaggtaccgaggtgcgtgaacttc
acacctatcgtggagctacttgattctagggttgtgtcggcacattttagcccagcttta
ccgcattggacgccggagaggaggaggagataa
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