Raphanus sativus (radish): 108827297
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Entry
108827297 CDS
T06014
Name
(RefSeq) probable alpha-mannosidase At5g66150
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108827297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108827297
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
108827297
Membrane trafficking [BR:
rsz04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
108827297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
108827297
NCBI-ProteinID:
XP_018456174
UniProt:
A0A6J0L997
LinkDB
All DBs
Position
9:37123542..37129657
Genome browser
AA seq
1033 aa
AA seq
DB search
MVRPGLCLLICVIVSVTCCLWLESVNGVYVKYGTEARVVPDKLNVHLVPHSHDDVGWLKT
VDQYYIGSNNSIQKACVRNVMDSVMDSLRRDPNRKFVFAEMAFFTRWWGEQNSETHEQVK
KLVHSGQLEFVNGGWSMNDEAACHYIDMIDQMTLGHRFIMQTFNITPRAAWQIDPFGHSS
VQAYLLGAELGFDSLHFARIDYQDREKRKDEKSLEFIWRGSETFASSSQIFTNTFPVHYS
PPTGFHYEITDDYAPLQDDPLLDAFNIKEAVDNFVHASRFYANVTRGNHVMWTMGDDFQY
QFAESWFRQMDRLIHYVNKDGRVNAVYSTPSLYVDAKNADNNITWPLKTHDFFPYADRDN
AYWTGYFTSRPSFKRYVRSLSGYYLAARQLEFLVGKKSGGPNTSSLGDALGIAQHHDGVS
GTAKQHVTNDYAKRLSLGASEAEKVVNSALANLLNKAHTKPDISLTQCSSMNISYCPVTE
ETISDQKSLILVAYNSLAWNRTEVIRIPVNDAGLNVEDSSGNTLDAQYIPMDNVTSNLRS
NYSKAYLGISSQQSPKYWLVFKATVPPLGWNTFFISKATGAGSNKNRHSPGTFSPMKGIT
EIGPGNLKLVFSPDSGLLKQMHNSRTGANILVDQNYLWYASNVGDSNNSQVSGAYIFRPN
ASLAYAASSKPELQIVRGPLVDEVHQQFSPWVSQVIRVYKDKEHAEFEYTIGPIPVGRDY
VGKEVITRMVANMSTEKTFYTDSNGRDFLKRVRDNRTDWVLKVKEPIAGNYYPLNLGMYT
KDKKVELSVLVDRATGGGSIKDGELELMLHRRTCMDDSRGVEESLEETVCINGTCTGLTV
RGSYYVSINKVGGEGARWRRGTGQEIYSPLLMAFTHENKEKWKGSNSVKGNAMDPLYAFP
PNVALITLQELDLGNVLLRLAHLYEAGEESEYSKVAKVELKKLFTGKTIKGVKEMSLAAT
QEKAKMKEKMKWKVEGEEAKSSSHTQKGGPLDSSALVVELAPMEIRTFLLQFSQKPAKQQ
QQQPRRRKFILGF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggtgagacccggattgtgtctgttgatctgtgttattgtttctgttacctgttgtctt
tggcttgagagcgttaatggcgtatacgtaaagtacgggacagaagctagagtcgtgcct
gacaaacttaacgtgcatctagtcccgcattctcatgacgatgtcgggtggttaaaaacc
gttgatcagtactacatcggatcaaacaacagtatccagaaagcatgcgtgagaaacgtg
atggactcagtgatggattcgctgcgtcgcgatcccaatcgaaagtttgtgtttgcggaa
atggcattctttacgcgttggtggggagaacaaaactccgagacacacgaacaagtgaag
aagcttgtgcattccggacaacttgagtttgtaaacggaggatggagtatgaacgacgaa
gcagcgtgccattacatagatatgatagaccagatgacgttggggcatcggtttataatg
cagacattcaatatcactccacgcgcagcttggcagatcgatccctttggtcattcctct
gtgcaggcttacctcctgggagcagagctaggttttgattctcttcatttcgcgagaatc
gattaccaagacagagagaagcgcaaggacgagaaatccttagaattcatctggagggga
tccgaaacttttgcatcttcttctcagatattcaccaataccttccctgttcactatagc
ccgcccactggctttcactacgaaatcaccgatgattacgctcccctccaggatgatcct
cttttggatgccttcaacatcaaggaggccgttgacaatttcgtccatgcttcacgcttt
tatgccaatgtgactcgagggaaccatgtgatgtggacaatgggtgatgattttcagtac
cagttcgccgagtcttggttcagacagatggacagattgatccattatgttaacaaggat
ggccgtgtgaacgccgtctactccacaccatctctctatgttgatgccaagaatgctgac
aacaacatcacttggcctctcaagacacatgactttttcccatatgcagatcgggataac
gcctactggactggctacttcaccagccgcccttcttttaaacgttatgttcgctctctt
agcggatactacttggctgcaaggcaacttgagtttctggtgggaaagaaatctggaggt
ccaaacacttccagccttggggatgctttaggaatagcgcagcaccatgatggtgtctct
ggaactgccaagcagcatgtgacaaatgattatgccaaaagactatcgcttggtgcttct
gaggcagaaaaagtggtgaattccgcgctggcaaacttattgaacaaggcacatacaaag
cctgacatatcattaacccagtgctcgtcgatgaatatcagctattgcccagtgacggaa
gaaaccatttcagaccagaagagcttgattctggtggcctataactcccttgcatggaat
cgtacagaagtcatcaggattccggtcaatgatgcaggtttaaacgtggaagattcatca
ggaaacacccttgatgctcaatacattcctatggataatgtcacgagcaacctgagaagt
aactactcgaaagcttatttaggaatatcttctcaacagagtccaaagtattggcttgtg
tttaaagcaacagtgcctccacttggttggaacacattcttcatatctaaagcaaccggg
gcaggaagcaacaaaaacagacactcgccagggacatttagtccaatgaagggtataact
gagattggtccaggaaatctaaagctcgtgttttctccagactctggtcttctcaaacag
atgcacaactccagaacaggagctaacatactggtggaccagaactatctctggtatgct
tcaaatgtgggggactcaaataattcccaggtttccggtgcatatattttccgacctaat
gcttccttggcgtatgctgcttcatcgaaaccagagttgcagattgtacgtgggcctcta
gtagatgaggtgcaccaacagttcagtccttgggtgtcacaggtgataagagtgtacaaa
gacaaagagcatgcagagtttgagtacactataggtccaatacctgttggtagagattac
gtaggaaaagaggtgattacacggatggtagcaaatatgagtacagaaaagacgttttat
actgactctaacggaagagacttcctgaaacgggtcagggataacagaacagactgggtt
ctcaaagtgaaggaaccaatagcaggaaactactatccgcttaatctgggaatgtacaca
aaagacaagaaagtagagttgtcggtgttggtagacagggctactgggggtggtagtatc
aaggacggtgaactagagttgatgctccacaggcgtacgtgcatggatgattcgagagga
gtggaggaaagccttgaggagactgtgtgtatcaatggtacatgcacaggattaacggta
cgtgggagttactatgtaagcataaataaggtaggaggagaaggagcgaggtggagacga
gggacaggccaggaaatatacagtcctcttctaatggcattcacacacgaaaacaaggag
aaatggaaaggctccaattctgtgaaaggtaatgcaatggatcctctctacgccttccct
ccaaacgttgctctcatcactctccaggagctggatctcggcaacgttcttctccgcctg
gctcatctctacgaggctggagaagagagtgagtactcgaaagtcgctaaagttgagctg
aagaagttgtttaccgggaaaactatcaaaggagtgaaagaaatgagtttggcagcgact
caagagaaggctaagatgaaggagaagatgaagtggaaagtggaaggtgaagaagccaaa
tcttcatctcatactcaaaaaggaggaccacttgacagctccgcattagttgtagagctt
gctcccatggagattcgtactttcttgctccagttctcccagaagcctgcaaaacaacaa
caacaacaaccaaggagaagaaagtttattctgggattttga
DBGET
integrated database retrieval system
