Raphanus sativus (radish): 108827398
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Entry
108827398 CDS
T06014
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NOP2A-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108827398
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108827398
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108827398
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
108827398
NCBI-ProteinID:
XP_018456289
UniProt:
A0A6J0L9K7
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All DBs
Position
9:8083485..8087403
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AA seq
725 aa
AA seq
DB search
MVLTRSKKRVTKSQTPPSNKAEKPQALALKRKAAEKPQPLASKKGGAKSQKKQPPSKKQK
KEVVEEEEDPREKDEEVSDYDAASTDAELEESDGGEERSNGLGSSGFFSDDDGEENDEDD
GEEVLGDDFLDGSGDEDEEEERSDSGSDSDSDDGDIEKESRLIDEKEAKEEADAEAELLD
FNKEAGDDAFRLPTEEELEEEARGPPDLPLLQSRIKEIVRALSNFSVLRPNGASRKDCVE
QLKSDLASYYGYNSFLIGALFELFPPVELMELIEAFEKQRPTSIRTNTLKTRRRDLADVL
LNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYLAGFYMLQGASSFLPVMALAPRENERI
VDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGRELP
KVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVDATS
KTGGYIVYSTCSLMVAENEAVIDYALKKRSVQLVKTGLDFGQDGFVRFREHRFHPSLNKT
KRFYPHVHNMDGFFVAKLKKMSNMKQASEGDGDDEALGTVDEADVSSDDDEADVSSDDDE
AEAMEEMEKPSVPKKQLEKTKDEAEALGTADEADVSSDDDEAEAMEEMEKPSVPKKQLKK
TKESKERLAKSKENKSGKKDKKSKSKNAPKIKKKQRKSKTEVRMEISQAREEKRRAMREK
SKEKQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgtagcaagaagagggtgacgaaatctcaaacccctccgtcgaataag
gcggagaagccccaagctctagcattgaagaggaaggctgcggagaaaccccaacctctg
gcatcgaagaagggaggcgcgaagtcccagaagaaacaacctccatcgaagaagcaaaag
aaggaagtcgtggaggaggaagaagatcctcgcgaaaaagacgaagaagtttccgattac
gacgccgcctctaccgatgcagaattagaagagtctgatggtggagaggaaaggtctaac
ggcttaggctcttctggatttttctccgatgatgatggagaagagaacgacgaggacgac
ggtgaggaggtcttgggtgatgactttcttgacggtagcggcgatgaagatgaagaagag
gaacgttcggattcgggttcggactctgactccgacgatggggatattgagaaggagtcg
agacttattgatgaaaaagaagcaaaggaggaggcagacgctgaggctgagcttcttgat
ttcaacaaggaagctggagacgatgcgtttcggttaccaactgaagaggaacttgaagaa
gaagctcgtgggccacctgatctacctctacttcagagtagaatcaaagagattgttaga
gctctgtcgaattttagcgtgttgaggccaaatggagccagcaggaaagattgcgttgaa
cagctcaaatctgatcttgcttcttattatggctacaacagttttcttattggagcttta
tttgagctgtttcctcctgttgaacttatggaactaattgaagcctttgaaaagcaaagg
cctacatctatccggacaaacacacttaagactcgaagaagggatcttgctgatgtgctt
ttgaacagaggagtcaatcttgacccactaagcaagtggtcaaaagtcggccttgttgtt
tatgattcacaagtgccaatcggtgcaacccctgaatatttggccggtttctatatgctc
caaggtgctagttcgtttttgcctgtgatggcccttgcccctcgagagaacgagcggatt
gtggatgtagctgctgctcctgggggtaaaactacttacgtcgctgctctaatgaaaaac
accggcttgatattcgcgaatgagatgaaagtacctaggctcaagtcgctaaatgccaat
ctgcaccgcatgggggtcacaaataccatagtttgtaactatgatggaagagagctacca
aaggtgttaggggagaaatcggttgatagagtattgttggatgcaccttgcagtgggact
ggggtcatttcgaaagatgaatcagttaaagtttcgaaatccctggaggatataaagaaa
tttgctcacttgcaaaagcaacttttactcgctgctattgatatggtggatgccacttcc
aaaaccggtggatatattgtttactcaacatgttcacttatggttgctgagaacgaagcc
gtcatcgactatgctctcaaaaagaggagtgttcaactcgttaaaactggactggacttc
ggccaagacggatttgtaagatttagagaacatcgatttcatccgtctttaaacaagacc
aaacgtttttatcctcatgtacacaacatggatggattctttgtggcgaagctaaagaag
atgagtaacatgaaacaagcttcagaaggtgatggtgatgatgaggcgttgggaactgta
gatgaagctgatgtgtccagtgatgatgatgaagctgatgtgtccagtgatgatgatgaa
gctgaggccatggaagagatggagaaaccttccgttcccaagaagcaactcgagaaaact
aaagatgaagctgaggcgttaggaactgcagatgaagctgatgtgtccagtgatgatgat
gaagctgaggccatggaagagatggagaaaccttccgttcccaagaagcaactcaagaaa
actaaagaaagcaaggagagacttgcaaaatcaaaggagaacaaaagtggcaagaaagat
aagaaatcaaaatctaaaaatgcacctaaaataaagaagaagcaaaggaagagcaaaact
gaagtgaggatggagatttctcaagctagggaagagaaaagaagagcaatgagagagaag
tcgaaggagaagcaatga
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