Raphanus sativus (radish): 108827448
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Entry
108827448 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108827448
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108827448
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108827448
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108827448
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108827448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108827448
NCBI-ProteinID:
XP_018456349
UniProt:
A0A6J0L9R2
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All DBs
Position
9:6538759..6543067
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AA seq
949 aa
AA seq
DB search
MNIQTDQDGSRAVFRKIELHPARKPFTGFSNRGSDFKMETLNPRSSNNNNRAFSSPSVKK
LDGPDSFELDRELTFTKTIRKIGAGLKNLGNTCYLNSVLQCLTYTEPLAAYLQDVAHEQR
CRVEGFCALCAMQKHVRNALQATGKILAPKYLVSNLRCISQNFRKCRQEDAHEYMISLLE
CMHKCCLPSGVPSESSDAYRSSLVHKIFGGSLRSRVKCAQCSHCSDKFDPFLDLSLDIWR
ADSLRRALLRFTAVELLDNGGKVYQCERCKQKVKAEKQITVFKAPSVLTVHLKRFEAHRA
EKIDKKVEFPPAIDMKPFVSGPYEGNLKYTLYSVLVHYGGSIDSGHYYCYVRTSSGMWYS
LDDNKVIQVSEKTVFNQKAYMLFYVRDRQKTAPKKPVTVAKKETSKESVAMNRASLIISS
NRNDQVNGSTVLKACSLNAPVPNGTAPLRACDKGAPACLTPKDVNGKETQNNPPSSLEAR
EVLKGQNSTASVKASDQSAPVVLTQKDTNAKENQKDPPSSVEAKEIVEMENSAAPSESCD
QGAPAVLTSKDLNAKETQADPPSSVEARENLERPCDVGSPAVLTQKDLNNNKKEESLPQA
NGEGSLVKEDSKAACIVLPGMASPLLDDRTNTQILVNLPTCVAKAENSVDENNSANNLNE
SDTSLKVKNASIGYSPIEEAVDHHQTLGHQLEESTELTKPTSAEETLTAPRKTRKRNMKT
VQVGLSSFKLALGVRKKKKQKKGRSKELLSKKRATDLERSTPLITSKAASGSACLHGKGK
SVSVENERLRASNGNMLLASATVELKERTNQNGAVLASDQQQPLKRSDLSEASQNAKRKR
DSSKEEQILLQKEQVTILTRGLPETVVAKWDEEVSASKKTGKSESTRIGYVADEWDEEYD
RGKKKKMRNKEEMYVGPNTFQAFASKKQQTDTKKKWTQGRNTAKTGFRI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccagacggatcaggacggatctcgcgccgtatttagaaagatcgagcttcac
cccgcgaggaaacccttcacaggcttctctaatcgcggctccgatttcaagatggagact
ttgaatccacgctcctctaacaacaacaacagagccttctcatcaccctccgttaagaag
ctggacggtcccgattcgtttgaattggatcgagagcttactttcaccaaaaccatccgc
aaaatcggtgctggtttgaagaatctcggaaacacatgttaccttaactccgtgttgcaa
tgtttgacatacaccgagccattagctgcttacctgcaagatgtcgcgcatgagcaacgc
tgccgtgtggaggggttttgtgctttatgtgcaatgcagaagcatgtcaggaatgctctt
caagctactggcaaaatcttagcgcctaaatatttagtctcgaacctgcgatgcatatcg
caaaacttcaggaaatgtaggcaggaagacgcacatgagtacatgatcagtttgcttgag
tgtatgcacaagtgttgtctcccttctggtgtaccaagcgagtcctctgatgcttacagg
agcagcttggtacataaaatatttggtggtagcctccgtagtcgggtgaaatgtgcacaa
tgttcacattgttctgacaagtttgatccatttctggacctaagcctagacatatggagg
gcagattcattgcggagagcacttttacgtttcaccgctgttgagctcttagataatggt
ggaaaggtttaccaatgtgagagatgcaagcagaaagttaaagctgaaaaacagattact
gtttttaaagcaccttctgttctcactgtacatctcaagcggtttgaagcacacagagcc
gaaaaaatcgacaagaaggtcgagtttccccctgcaattgacatgaaacctttcgtcagt
ggtccatatgaaggtaatttgaagtacactctatacagtgtgttagttcattatggtgga
agtatcgattctggtcactactactgctatgttcgcacttcaagtggcatgtggtattcc
cttgatgataacaaggttatccaagttagtgagaagactgtgttcaaccagaaagcgtat
atgttattctatgttcgtgatagacaaaagacagccccaaagaaaccagttactgtggct
aagaaggaaacttccaaagagagcgtagccatgaacagagcttctttgattatatcttct
aacagaaatgatcaggtgaacgggtcaacagtcctcaaagcatgtagtttaaatgctcct
gttcccaatggtacagcacccttgagagcatgtgataaaggtgctcctgcttgcttgacc
ccaaaagatgtgaatgggaaagagactcagaacaatcccccaagcagtttggaggcaaga
gaggtccttaaggggcaaaatagcacagcatcagttaaagcaagtgatcaaagtgctcct
gttgtcttaacccaaaaagatacaaatgccaaagagaatcagaaagatcccccaagcagt
gtggaagcaaaagagatcgttgagatggaaaatagtgcagcaccctcagaatcatgtgat
caaggtgctcctgctgtcttgacctcaaaagatttaaatgcgaaagagactcaggcagat
cccccaagcagtgtggaggcaagagaaaaccttgagagaccctgtgatgtaggttctcct
gcagtcttaactcagaaagatttaaataataacaagaaggaagagtcacttccacaggct
aatggggaaggatctttggtaaaggaggattcaaaggctgcatgcatagtattaccagga
atggcttctcctctcctggatgacaggacaaacactcaaattcttgtgaatttgcctact
tgcgtggctaaagctgaaaatagcgttgacgagaataactctgctaataatttgaacgag
tctgacacttcactgaaggttaaaaatgcatcgattggttactcacctatcgaagaagcg
gttgatcatcatcagactttgggacatcagttggaagaatcgaccgaattaacaaagcca
acgtctgctgaggagactctcaccgcaccaagaaagactcgcaagcgtaacatgaaaacc
gttcaggtggggttatcatctttcaagctggcacttggcgttcgtaaaaagaagaaacaa
aagaagggaagatctaaggagcttttatccaagaaaagagctacagatctagagcggtcc
actccgctgataactagcaaagctgcttctggctctgcttgcttgcacgggaagggtaaa
agtgtcagtgtcgaaaatgaaaggctaagggctagtaatgggaatatgctgcttgcctct
gcaaccgtagagctgaaggagagaactaaccaaaatggtgcagttcttgcgtcagaccaa
caacagccgttgaagagatcggacttgtctgaagcaagccaaaacgccaaaagaaagaga
gacagttcgaaagaagaacaaatattgttacagaaagaacaggtgaccattctcacaagg
ggtttgccagagacagttgttgcgaaatgggacgaggaagtttcagcttctaagaagacg
ggaaaaagtgaaagcacgagaattggatatgtagctgatgaatgggatgaagaatatgac
agagggaagaaaaagaagatgaggaacaaagaggagatgtatgtagggccgaacacgttc
caggcgtttgcatctaagaaacaacaaacggatacaaagaagaaatggacacaaggcagg
aatactgcaaagacaggcttccggatataa
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