Raphanus sativus (radish): 108827603
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Entry
108827603 CDS
T06014
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108827603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108827603
Spliceosome [BR:
rsz03041
]
Complex B
Other components
Prp19-related factors
108827603
Complex C
108827603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
108827603
NCBI-ProteinID:
XP_018456548
UniProt:
A0A6J0L9N1
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Position
9:complement(1556919..1559475)
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AA seq
615 aa
AA seq
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MDLLPPPKSTATTFYDHSNDPWFKNRFTESESSEKTASVAFKAVPLYLKRQGFRPRNPED
FGDGGAFPEIHVAQYPLGMGKNKSNKPGSKTLPVTVDAEGNVVFDAIARQNENSKKIVYS
QHKDIIPKVLKNDGGEDGVVDEEEELQRQIQETTEETKAAMEKIVNVRLSAAQPTNVPRQ
SGDSQYIKYKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKASGSPPVPVMH
SPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEAL
YVAEQKAREAVSMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAPASMPVSVDRARS
ESVDPRGDYEYDHDRDREREREREREREREGPKESREEMEERIKRDKIRAERRRERERER
RLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGGGKGGEVMYDQRLFNQEKGMDSGFA
TDDQYNVYDKGLFTAQPTLSTLYKPKKDTDEEMYGNADEQLDKLKNTERFKPDKAFTGAS
ERSGKRERPVEFEKEDEQDPFGLDRFVSDVKKGKKPLDKIGSGGTMRASGGGGSSSRDDY
GGSGRTKINFERSGR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaccttctacctccgccgaaatcaacagccaccacgttctacgaccactcgaacgat
ccatggttcaaaaaccgtttcaccgagtccgaatcctccgagaaaaccgcctccgtggct
ttcaaagcggtgcctctttacctgaaacggcaaggcttccgtcccaggaaccccgaggac
tttggagacggtggtgctttccctgagatacacgttgctcagtatccactcgggatgggt
aagaataagtctaacaagcctgggtccaagactctccctgttactgtggatgctgaaggg
aacgtggtgtttgacgctattgcgaggcagaacgagaactctaagaagattgtttactct
cagcataaggatattatccccaaggtgctgaaaaacgatgggggtgaggatggtgttgtg
gatgaagaggaggagttgcagaggcagatacaggagactactgaagagactaaagctgct
atggagaagattgtgaatgtgaggctgagtgctgcgcagcctactaatgtacccaggcaa
tctggtgactcgcagtatattaagtataagccgtctcagcagtcttcggcttttaattca
ggagctaaagagaggattattaggatggtggagatgcctgtagatcctcttgatccgcca
aagtttaagcacaagagagtcccgaaggcttctggctctcctcctgttccggtcatgcat
tcaccgcccaggcctgttactgttaaggatcagcaagactggaagatccctccttgtatc
tcaaactggaagaatccgaaaggttacactatccctcttgataaacgtctcgctgctgat
gggagaggtttacaagacgttcagatcaatgataactttgccaagctatctgaggctctc
tatgtagctgagcagaaagctagagaggcggtttcgatgcggtcaaaggtgcagaaggag
atgatgatgaaggagaaggaaagaaaagagcaggagttgagagctcttgctcaaaaagct
cgttctgaaagaactggtgctcctgcgagtatgcctgtctctgtagacagggctaggagt
gaaagtgttgacccaagaggtgattatgagtatgaccatgaccgcgaccgtgagagggag
agggagagggaaagggaaagagagagggaagggccaaaggagagtagagaggagatggaa
gagcggataaagagggataagataagagcagagcgtcgcagggaaagagagagggagaga
aggttggaagctaaagatgctgccatggggaagaagagcaagatcacgagagacagagac
cgtgatatcagtgagaaagtcgctcttggaatggcctctacaggaggaggcaaaggcggc
gaagttatgtatgatcaacgactcttcaaccaagagaagggaatggattcaggtttcgca
accgacgaccagtacaacgtatacgacaaaggcttgttcaccgcacagcccactctctca
acgctctacaagcctaagaaggacacagatgaagaaatgtacggaaacgcagacgagcag
ctcgataagctcaagaacaccgagagattcaaaccagacaaagctttcaccggtgcttcc
gagcggtcgggcaagagagaacgacctgtggagttcgagaaggaagatgaacaagatcct
ttcggtctggaccgtttcgtgtccgatgtgaagaaaggtaagaagcctttggacaaaatc
gggtctggtggaacgatgagagctagtggcggtggcggaagctcttctcgtgatgactat
ggtggttctggtcgtaccaagatcaatttcgaacgcagtggtcgttag
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