Raphanus sativus (radish): 108827690
Help
Entry
108827690 CDS
T06014
Name
(RefSeq) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE homolog, chloroplastic
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
108827690
NCBI-ProteinID:
XP_018456655
UniProt:
A0A6J0L8X6
LinkDB
All DBs
Position
9:27247517..27250575
Genome browser
AA seq
767 aa
AA seq
DB search
MAFTFFSPHPVFLSLGRTTSSSSFSFKPAYSPFSRNPRRHLQLAAGPTRRSSYPNPADDD
PPEAPEDSMHGVSKFQQIQRQAARARKLEEEDFEKNRNTYLSAIADVEDAPETGRDDVES
GGDLFSDIDRAISMKRSEFVKKGLLQPNPPKTASSKKTNEEEEEEDDVTDELDEEEAVDL
DEIDKLTGLTEASDEEDWVDEEGNPRIISKKKEHQFEFDLDDFGESKARIVEPKFRLSLA
ELLDESKVVPISVYGDLDVEITGIQHDSRGVSAGDLFVCCDGGDDSVLSEADKRGAVAVV
ASKEIDIEDTLGCRALVIVEDTEAVLAALASSFYRHPSKDMAVIGVTGTNGKTTTTYLIK
SLYEAMGVRTGMFSSVSCYVHGDNKMDSTTTSPDAVLVQSMMAKMLHNGTEALVMEASPQ
ELASGKCDEVDFDIAVFTNLAREDSGFRGTDEEYRDAEAKLFARMVDPERHRKVVNIDDP
NAAFFVQQGNPDVPVVTFAMENTKADVHPLKFELSLFETQVLVNTPQGILEISSGLLGRH
NIYNILAAVAVGIAVGAPLEDIVRGVEEVDAVPGRCELIDEEQAFGVIVDHANTPDGLSR
LLDSVRELKPRRIITVIGCAGETERGKRPVMTKIATEKSDVTMLTSDNPGNEDPLDILDD
MLAGIGWTMQEYLKHGEHDYYPPLANGHRLFLHDIRRVAVRCAVAMGEEGDMVVVAGKGH
EAYQLEGDKKEFYDDREECREALQYVDELHQAGIDTSEFPWRLPESH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggccttcactttcttctctcctcaccccgtcttcctctctctaggtcgaaccacctct
tcctcttccttctccttcaaaccggcatactcaccattctcccgaaatccccgtcgtcat
cttcagctagcggcgggccccacccgtcgtagctcttacccgaacccggcggacgacgac
ccgcccgaagccccggaggattcgatgcacggcgtctccaagtttcagcagatacagcgc
caagccgccagagcgcggaagctggaggaagaagacttcgagaagaatcgaaacacgtac
ctctcggccatcgctgacgtggaagacgcgcccgagacgggacgcgatgacgtggaatcc
ggaggcgatctgttctcggacattgatagagccatctcaatgaaacgcagcgagttcgtt
aaaaaaggactgctccaacctaatcctcccaaaacggcgtcgtctaagaagacaaacgag
gaagaagaagaagaggatgacgtcaccgacgagcttgacgaagaagaagctgtggattta
gacgagatcgataaactgactggattaaccgaagcttccgacgaagaagactgggtcgac
gaggaagggaaccctaggatcatcagcaagaagaaggagcatcaattcgagttcgatttg
gatgatttcggcgaatccaaggcgagaatcgtggagcctaagttcagactgagcttagcc
gagctcttggacgagagcaaagtggtgccgatctcagtctacggcgacttagacgtcgag
atcaccggaatccagcacgattcgcgaggcgtaagcgccggagatctcttcgtgtgctgc
gacggaggagacgactccgtcctgagcgaagctgacaagagaggagcggtggcggttgtg
gctagcaaagagatcgatattgaagatacgttaggctgtagagcgctcgtcatcgtcgaa
gacaccgaagcagtcttggctgcgttagcttcttcgttttataggcatccgtcgaaggac
atggcggttatcggagtcacggggactaacgggaagacgaccaccacgtatttgattaaa
agcctctatgaagctatgggtgtgagaacaggaatgttcagcagtgtttcttgttacgtc
catggagataacaagatggattcaacgacgacgagtcctgatgctgttttggttcagagt
atgatggcgaagatgttgcataatggaaccgaagctctggttatggaagcttctcctcaa
gaactcgcttcagggaaatgcgacgaagttgatttcgacattgcggtcttcacgaattta
gccagagaggatagtggctttcgcggtactgatgaggagtatagagatgctgaagccaag
ttgtttgcaagaatggtcgacccggaaagacacaggaaagtggttaacattgacgatcca
aacgcagcgtttttcgtccagcaagggaaccctgatgttcctgttgtgacgtttgcaatg
gagaacacgaaagcggatgttcacccgttgaagtttgagctgtctttgtttgagacacag
gttttggtcaatacacctcagggtatactggaaatttcgtctggtttgttaggacggcat
aacatttataacattcttgctgctgttgctgtcgggatagctgtcggagctcctcttgag
gatattgttagaggtgttgaggaagtcgatgctgtcccggggaggtgtgagttgattgat
gaggaacaagcttttggtgttattgtggatcatgctaacacacctgatggtttgtcaagg
ctgcttgattcggttcgagagcttaagccaagaagaatcattactgttattggctgtgcg
ggtgagactgagagagggaaacgaccggttatgacgaaaatcgcaactgaaaagagtgat
gtgacgatgttgacatctgataatccggggaatgaagatccattggacatattggatgac
atgttggctgggattggatggacgatgcaagagtatctgaaacacggagaacatgattac
tatcctccattggcaaatggtcatagactcttccttcacgacattagacgtgtagctgtg
cgttgtgctgttgcgatgggtgaagaaggtgacatggttgtggtagcagggaaaggccac
gaagcgtatcagcttgaaggtgataagaaagagttctatgatgatcgagaggaatgtcgg
gaagcattacaatacgttgatgagcttcatcaagctggaatagacacaagcgagttccca
tggaggttaccagagagtcattaa
DBGET
integrated database retrieval system
