Raphanus sativus (radish): 108827743
Help
Entry
108827743 CDS
T06014
Name
(RefSeq) probable copper-transporting ATPase HMA5
KO
K17686
P-type Cu+ transporter [EC:
7.2.2.8
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108827743
Enzymes [BR:
rsz01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.8 P-type Cu+ transporter
108827743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
HMA
Hydrolase
Hydrolase_3
ABC2_membrane_4
Motif
Other DBs
NCBI-GeneID:
108827743
NCBI-ProteinID:
XP_018456724
UniProt:
A0A6J0LAT9
LinkDB
All DBs
Position
9:27017226..27021783
Genome browser
AA seq
999 aa
AA seq
DB search
MATKLLSLTCIRKERFSGRYPPVLRKHLNSRPRGGGDGSPSETAVLKIDEEEAVSDAVFR
VTGMTCSACAGSIEKEIKRLPGIHEAVIDALNNRAQIQFYPTSVDVETIRETIEDAGFEA
SLIENEANERSRQVCRIRINGMTCTSCSSSIESVLQSLYGVQRAHVALAIEEAEVHYNPT
LLSYDKLLEEIDNAGFEAILISTGEDVSKIDLKIDGEFTDEAMTMIERSLEALPGVQSVE
ISHGSDKISVLYKPDVTGPRNFIRVIESTVFGHSGHIKATVFSEGGVGRESQKQEEIKQY
YKSFLWSLVFTVPVFLTAMVFMYIPGIKHLLMFKVINMLTVGEIIRWVLATPVQFIIGWR
FYVGSYKALRRGSANMDVLIALGTNAAYFYSLYTVLRAATSPDFKGVDFFETSAMLISFI
ILGKYLEIMAKGKTSQAIAKLMNLAPDTAILLTVDEEGNVTGEEEIDGRLIQKNDVIKIV
PGAKVASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIGGTLNENGVLHIKVTRVGSES
ALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTWLAWFLAGKLHWYPESWIP
SSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALERAHKVN
CIVFDKTGTLTMGKPVVVKTKLLKNMVLREFYELVAATEVNSEHPLAKAIVEYAKKFRDD
EENPTWPEARDFVSITGTGVRATVKGREIMVGNKSLMSGYKVTITADAEELLAEAEEMAQ
TGILVSIDNELTGVLAVSDPVKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGID
SVIAEAKPEQKAEKIKELQAAGHVVAMVGDGVNDSPALVAADVGMAIGAGTDIAIEAADI
VLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPSTRFRLPPWIAG
AAMAASSVSVVCCSLLLKNYKRPKRLDSLAIREVQVERV
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagctattgtcgctcacatgcatacgcaaagagagattcagcggccgttac
cctcctgtgctgcggaaacatctaaacagcaggccacgcggcggcggagatggatcaccg
tcggagacggcggtgcttaagatcgacgaggaggaggcggtctccgatgcggttttccgc
gtcacggggatgacatgctccgcgtgcgctggatctatcgagaaagagatcaagcgtctt
cccgggattcacgaagcggtcatcgacgctctcaacaaccgggctcaaatccagttctac
cctacctctgtcgatgtggagacgattcgtgagactattgaagatgctggatttgaagca
tcactgatagaaaatgaggcgaatgagaggtccagacaagtatgcaggataagaataaac
ggtatgacttgtacctcatgttcttcatccattgaaagcgtactgcaatcactttatggt
gtacaaagagctcatgttgccttagcaattgaagaagctgaagttcattataatcccacg
ctcctgagttacgataaactactggaagagatagataatgctggatttgaagcgattctt
ataagcacaggcgaagatgtcagcaagattgatttgaagatcgatggcgagtttactgat
gaagcaatgacgatgatagaaagatcgcttgaagcacttcctggggttcagagtgttgag
atcagccatggaagtgataagatatctgtgttgtacaaacctgatgtgacggggccgagg
aacttcattcgtgtgatagagtctactgtctttggtcatagtggtcacatcaaggcaaca
gtattctccgagggaggggtgggcagagagtctcaaaagcaagaagagatcaagcagtac
tataagtcgtttctctggagtttggtttttacggtaccagtgtttttgacagccatggtc
tttatgtatatccctggaattaaacatttgctaatgtttaaggtcatcaatatgctcacc
gttggagaaatcataaggtgggttttggctacacctgtacagtttatcatcggctggaga
ttctatgttggctcttacaaggctttacgccgaggatcagctaacatggatgttctgatt
gctctgggaacaaatgcagcttatttctattcgttatacacagtgttgagagctgcaaca
tctcctgatttcaagggagtagatttctttgagactagtgccatgctcatttcgtttatc
atactaggaaagtatctggagataatggcaaaaggcaaaacatctcaagcgatcgcaaag
cttatgaacttggcaccagacactgcgatattgttgactgtggacgaggaagggaatgtg
actggtgaagaagagattgatggccgattgatacagaagaacgacgtgatcaagatcgtt
cctggtgctaaagtagcttccgatggttatgttatatggggacaaagtcatgtgaatgaa
agtatgataactggagaggcaaggccagtggcaaagagaaagggtgatactgttatagga
ggcacactgaacgagaacggtgttctgcatattaaggtgacaagggttggttcagagagt
gctcttgcacagattgttcgacttgttgaatccgcccagctagccaaagctccagttcag
aagttggctgatcggatatccaagttctttgttcctctggtaattttcctatcgttctca
acttggcttgcctggttcttagctggaaaactgcattggtaccctgaatcatggatacct
tcttcaatggatagctttgagctagctcttcagtttggaatctctgtcatggtcatagct
tgtccatgtgctcttgggctggctactccaaccgctgttatggttggaactggggttggt
gcatcccaaggtgtgctgataaagggtggtcaagctctagaaagagcacacaaggtaaat
tgcattgtatttgacaagacaggaactctcacgatggggaaacccgttgttgttaaaacc
aaactcctgaaaaacatggtacttcgagaattctatgaacttgtggctgcaactgaggta
aacagcgagcatccattggcaaaggccattgttgaatatgcaaagaaattcagagatgac
gaagagaaccctacgtggcctgaagcccgtgattttgtgtctatcactggaaccggagtg
agagcgactgttaaaggaagagagattatggtgggaaacaagagcctcatgtctggttac
aaagttactattacagccgatgctgaggagttgctagcagaagctgaagagatggcccag
acaggaattctcgtgtctatagacaatgagttaactggagttctagctgtttcggatcct
gtaaaaccgagtgctcgagaagccatctcaattctaaaatccatgaatatcaaaagcatc
atggtaacaggtgacaactggggaactgcaaactccattgctagagaagtcggtatcgac
tctgttatcgcagaagctaaacccgagcagaaagcagagaaaatcaaggaactacaggct
gcgggtcatgttgtggcgatggttggagacggagtcaatgactcacctgctctcgtggca
gcggatgtaggaatggccattggtgcaggaaccgacattgcaatagaagcagctgatatt
gtcctgatgaaaagcaacttggaagatgtgatcacagccattgatctatcgaggaaaacg
ttctcaaggatccgtctcaactacgtatgggctctcgggtataacctcatgggcataccg
atcgctgcgggggtgcttttcccgtctactcggttcaggttgcctccgtggattgcaggt
gctgcaatggctgcttcttctgtcagtgttgtgtgttgctctctcttgttgaagaactac
aaacgtcctaagaggcttgatagcctggcgatccgtgaggttcaagtggagcgggtttag
DBGET
integrated database retrieval system
