Raphanus sativus (radish): 108827790
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Entry
108827790 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108827790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108827790
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108827790
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108827790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
108827790
NCBI-ProteinID:
XP_018456775
UniProt:
A0A6J0L9A2
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All DBs
Position
9:2673522..2675664
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AA seq
319 aa
AA seq
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MSNAEQVISRGASSSSRSVVGEGTAADDEEVTVTTEEEVVRSGTLLELDLLDCPVCCHAL
TTPIFQCDNGHIACSSCCTKLRNRCPSCTLPIGVYRNRMMERVVEAIIVPCPNAKHGCTD
KFSYGKELVHEKECSFALCYCPAPHCNYSGLYIDLYRHYYANHSCPWEYFRCGYDGQAWM
HISDEILVLQEGREGPLVAIQCFEEEQGVYVTVNCITPCSPGVSEFSFQLSYSAYGNAAR
SMSFGMGEMNRIQKVSFETPDKDFMCVPHYFLDGETSLKMNICIRRREKKKEKKRKHDEE
TEVVDKVLRRRRGGNEEGV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgccgagcaagtcatcagcagaggagcgtcgagtagcagccgctccgttgtc
ggagaaggaacggcggctgatgatgaagaggttacagtaacaacggaggaggaggtagta
cgatcgggaacgctgttggaactggatcttctcgattgtcccgtttgctgtcacgcactg
acgacccctatctttcagtgtgacaatggacacatagcctgctcgtcttgctgtactaaa
ctgaggaacagatgcccttcttgcactttgcccattggtgtctatcgaaacagaatgatg
gagagagttgtggaagccatcatcgtcccttgccctaacgcaaaacatggctgcaccgac
aagttctcttacggcaaagagttggtccatgagaaggaatgcagtttcgctttatgctac
tgtcctgcgccacactgcaactactccggcctgtacattgatctctaccgtcactactat
gctaaccacagttgcccatgggaatatttcaggtgtggctatgatgggcaggcgtggatg
cacatcagtgatgagattttagttcttcaggaaggtagagaaggtccgttggttgcgatt
caatgttttgaggaagaacaaggagtgtatgtgaccgtgaactgtataactccttgttct
cctggagtgtcggagttctcctttcaactctcttactcggcgtacggaaacgcagctaga
tccatgtcgtttggaatgggtgagatgaataggattcagaaagtgagcttcgaaactcct
gacaaggacttcatgtgtgttcctcactatttcttggatggggagactagtttgaagatg
aatatttgcatccgccgaagagagaagaagaaggagaagaaaagaaaacatgatgaggag
actgaagttgttgacaaagttctcaggagaagaagaggagggaacgaggaaggagtatga
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