Raphanus sativus (radish): 108827821
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Entry
108827821 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108827821
KO
K23325
transducin beta-like protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108827821
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108827821
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Lactonase
Beta-prop_RSE1_2nd
RITA
PROPPIN
Beta-prop_DCAF12
Beta-prop_SPT8
DUF6479
YSIRK_signal
Motif
Other DBs
NCBI-GeneID:
108827821
NCBI-ProteinID:
XP_018456818
UniProt:
A0A6J0LAF4
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All DBs
Position
9:complement(24496474..24498970)
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AA seq
429 aa
AA seq
DB search
MDSILTVGIASVVIGALIAVFFFGSYLRKRTSEVHSMAKAEPQEAPIRVVPKSNPKKNHP
KSHATDKNQNKRHHPLDLNTLKGHGDSVNALSFSSDGKSLATACGDGVIRVFKLDDASSK
SFKFLRINLQAGGHPTAVSFADDASSIVVSCHTMSGSSLYMYGEEKKTENQSKLPLPSIK
WERHNIHDKRSVLTISGATATYGTADGSTVIASCSEGTDIILWHGKTGKNLGHVDTNQLK
NHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNS
DKIITASKDGSIRLWNINVRYHMDEDPKTLKVFPIPLCDAGGNPLHYDRLSLCPEGKILA
ATHGSTLQWLCAETGSVLDTAEKAHEGDITCISWAPKAMTVGERKAQVLATAGVDKKVKL
WEAPTSQSV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatccttaccgtaggcatcgcatctgttgttatcggtgcgttgatagccgtc
ttcttcttcggcagctacttgaggaagcggacatcggaggtgcattccatggccaaagcg
gagcctcaggaagctccgatccgggttgttcccaaatccaatcccaagaagaatcatccc
aaatctcacgccaccgacaagaatcagaacaagcgtcatcatcctctagacttgaacacg
ttgaaaggacacggtgattccgttaatgccctctctttctcatctgatggaaagagctta
gccacagcttgcggtgatggagtcatcagagttttcaagctagatgatgcctcaagcaaa
agcttcaaatttttaaggatcaatcttcaagctggaggacatccgaccgctgtgtcattt
gcagatgatgcctcctctattgtcgtgtcttgtcatactatgtctggttcgtctctctac
atgtacggtgaagaaaagaaaacggagaaccagtccaagcttcctcttccttccatcaaa
tgggagcgccataatatccatgacaagagatctgtccttaccatctctggagctaccgcc
acttacggtactgctgatggaagtactgtcattgcctcttgttccgaagggactgatatc
atactttggcatgggaaaactgggaagaatttgggacatgttgatacaaaccagttgaag
aaccacatggctgctgtctcacctaatggacggtttttagctgctgctgcatttaccgct
gatgtcaaggtctgggaaattgtgtatcagaaagatggttccgtcaaggaggtttcaaga
gttatgcaactcaaaggccacaagagtgcagtgacttggttatgcttttctccaaactct
gacaaaatcattaccgcttctaaagatggttcaataagactctggaacatcaatgtccgg
tatcatatggatgaggatccaaagactttgaaggtgttcccgattccactttgcgatgcg
gggggaaacccgttgcactatgatcggctcagtttgtgcccggaggggaaaatattggca
gccacccatggttccacattgcagtggttatgtgctgaaactggaagtgttctggacact
gctgagaaagcccacgaaggggatatcacatgcatttcatgggcacccaaggcaatgaca
gttggggagagaaaggcgcaggtattagcgacagcaggggttgacaagaaagtgaagctg
tgggaagctccaacgtcgcagtctgtctaa
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