KEGG   Raphanus sativus (radish): 108827871
Entry
108827871         CDS       T06014                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108827871
Spliceosome [BR:rsz03041]
 Complex B
  Other components
   Complex B specific factors
    108827871
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Aladin WDR90_beta-prop_4th Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR41 DUF7165 Beta-prop_LRRK2 Beta-prop_WDR75_2nd VPS8_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_IP5PC_F WD_LRWD1 zf_topless Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 108827871
NCBI-ProteinID: XP_018456873
UniProt: A0A6J0LAK4
LinkDB
Position
9:5249424..5253722
AA seq 512 aa
MALEIEARDVIKIVLQFCKENSLSQTFQTLQSECQVSLNTVDSVETFVSDINSGRWDSVL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEEPERYLRMEHL
LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDTYPTTLNHTIKFGTKSHAECARFSPDGQFLVSSSVDGFIEVW
DYISGKLKKDLQYQAEETFMMHDEAVLCIDFSKDSEMLASGSQDGKIKVWRIRTGLCFRR
LERAHSEGVTSLTFSRDGTQLLSTSFDHTARIHGLKSGKLLKEFRGHTSYVNNAIFTSDG
TRVITASSDCTVKVWDSKTTDCLQTFKPPPSLRGSEASVNSVHLFPKNTEHIVVCNKTSS
ICIMTLQGQVVKSFSSGKREGGDFVAACVSTKGDWIYCLGEDKKLYCFSYQTGGLEHFMM
VHEKDVIGLSHHPHRNLIATYSADCTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtaataaagattgtgcttcagttctgcaaagag
aactccttgagtcagacgttccagacactacagagcgagtgtcaggtttctctaaacaca
gtagacagcgtcgagacgtttgtctctgatatcaatagtgggaggtgggactctgtactt
ccccaagtgtctcagcttaagcttcccaggaataaacttgaagacctttatgaacagatt
gtattggagatgattgaacttcgagagttggacactgcccgagctattttgaggcaaact
caggtgatgggtgtcatgaaacaggaggaacctgaaagatatttgcgcatggagcatctt
cttgtcagaagctattttgatccccatgaggcttatggagactcaaccaaagaaagaaaa
cgtgcacagattgctcaagctgtggctgccgaggttactgtggtacctccttcacggtta
atggctttgataggccaggctctaaagtggcaacaacatcaaggcctactcccaccggga
actcagtttgacctcttccgtggaacggcagctatgaaacaagatgtggaagacacatat
cctactactcttaatcatacaataaagtttggtacaaagagtcatgccgaatgcgctagg
ttctcaccagatggacagtttcttgtatcatcttctgttgatggttttatcgaggtatgg
gattacattagtgggaagctgaagaaagacttgcaatatcaagctgaagaaacattcatg
atgcatgacgaggctgtcctttgtatagactttagcaaagattcagagatgcttgcatct
ggctcacaagatggaaagattaaggtctggcgtataaggactggtctatgcttccgtcgt
cttgagcgtgcacattccgaaggagttacaagtctaaccttctctcgggatggaactcaa
ttactaagtacctcctttgaccacactgcaagaatccatggtttgaaatctgggaaattg
ttgaaagagttccgcggtcatacatcttatgtaaacaatgccatctttacaagtgatggt
acccgtgtaatcactgcctctagtgactgcacagtgaaggtctgggattcaaagacgaca
gattgtctacaaacattcaagccaccaccttcactaagaggaagtgaagcttcagttaat
tctgttcatctgttccctaaaaacacagaacacattgttgtgtgcaacaagacatcatct
atatgcatcatgacactccaaggacaggttgtgaagagtttctcatccggtaagagggaa
ggaggagattttgtagcagcatgtgtatctacaaaaggagattggatatactgccttggc
gaagacaagaaactgtactgcttcagctatcaaaccggtggtcttgagcattttatgatg
gtgcatgagaaagatgtgataggcttatcacaccacccacatagaaacctcatcgctacc
tatagtgcagattgcaccatgaagttgtggaaaccctga

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