Raphanus sativus (radish): 108827992 Help Entry 108827992         CDS       T06014                                  Name (RefSeq) protein SPA1-RELATED 2   KO K16240   protein suppressor of PHYA-105 1 and protein SPA1-related 2 Organism rsz  Raphanus sativus (radish) Pathway rsz04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:rsz00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     108827992  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rsz04121]     108827992 Ubiquitin system [BR:rsz04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Multi subunit type E3 associated proteins     108827992 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_C EIF3I Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Pkinase Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd PK_Tyr_Ser-Thr WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_like Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Motif Other DBs NCBI-GeneID:  108827992 NCBI-ProteinID:  XP_056849903 UniProt:  A0A9W3CEF6 LinkDB All DBs Position 9:19712361..19717620 Genome browser AA seq 988 aa AA seqDB search MDESSVGDVSSSINEAEAAHIQFKNGQQSLKPDEIQETKQVQAEVQPSSPDSSFGVIADF LDGKNVNETENEPCSSRQNANDDDDVVEELTVKTCEGSSVAIVGSSSSRGARLEINRSQL LHREGEKGITSILRNAGKSSTGEQVSVEPVEALAHGGGIKTKMLSQSGFSQFFVKKTLKG KGVTFRGPPLNRSKPTNLDQQSVASPLVTSKNTPAKVSGSTPLAVEAFGVFSLKGGSPSS CTNPSDSGCGGEGLSLRDWLKAERQEVNKAEGLRIFRLIVEHVDDSHSQGVVLCDLCPSL FKILKENEVKYVGSGFQRESSGKTLSQLEKPLVRRRLGDTGFASSPGFPAKKQKASGPSS RQWPMFQRAGNVNIQTENDFGATQELRLRSSQPQCSPSARSFTSMSEQLEVKWYASPEEL RDETCSVSSNIYSLGILLFELLSQFQSERAREAAMSDIRHRILPPKFLSENPKEAGFCLW LLHPEPSCRPSTRDILQSEVVNGIPDLYAEGLSLAIEQEDTESELLQHFLVLSQEQRQKH AGNLMEEIVSLEADIEEIVKRRCAISPVSVGEASSSSLASSVPEKRLVTNIKQLESAYFG ARIDVHLPEARYRLRPDRDLLRNRDESVISEHENSETWSSDDRVGAFFDGLCKYARYSKF ETRGVLRTGELNNTSNVICSLGFDRDEDYFATAGVSKKIKIFEFSSLFNESVDIHYPAVE MSNRSKLSGVCWNNYIRNYLASSDYDGIIKLWDVTTGQAISHFIEHEKRAWSVDFSEACP TKLASGSDDCSVKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDTR NLRTPWCILSGHNKAVSYAKFLDSETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGG HTNEKNFVGLSTADGYIACGSETNEVYAYHRSLPMPITAYKFGSIDPITGKEIEEDNNLF VSSVCWRKRSNMVVSASSNGSIKVLQLV NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atggatgaaagctcagtcggtgatgtgagcagcagcatcaacgaagccgaagctgctcat atccaattcaaaaatggtcagcaatctcttaaaccggacgaaatccaggaaaccaaacaa gttcaggctgaggttcagcccagttctcctgacagctcctttggagtgatagctgatttt ttagacggtaagaatgtgaacgagacagagaatgaaccgtgttctagccgccagaacgct aatgatgacgacgacgtggttgaggagttgactgttaaaacctgcgaaggatcgagcgtg gctattgttggtagttcgagtagtagaggagctaggttagagatcaatcgaagtcagctt ctgcatcgtgaaggtgagaaaggaataacaagtatcttgagaaatgcaggcaagtcttcc actggagaacaagttagtgttgaaccggttgaggcattggcccatggaggaggcatcaag actaagatgttgtcccagtctggtttctctcagttttttgttaagaaaactttgaaggga aagggagtcactttcagaggaccgccacttaatagatctaaacctactaatctggatcaa caatctgtagctagccctttggtaacgtcgaagaatactccagcaaaggtttcgggcagc actcctttggcggtggaggcttttggtgttttctctttgaaaggcggtagtccatcttct tgtactaacccttcagacagtggttgtggaggtgaaggtttaagtctgagagattggtta aaggcagagcgtcaggaagttaataaagctgaaggtttgcgtatctttaggctgatcgtg gagcatgtggatgattctcattcccaaggagttgttttatgtgacctatgtccatctttg tttaaaattctcaaggaaaacgaggtcaagtatgttggttcaggttttcagcgggaatct tctggcaaaactttaagtcaactcgagaaacctctggttagaaggaggttaggggataca ggatttgcttctagtcccggcttccctgcaaagaagcagaaggcaagtggacccagctct agacagtggcctatgtttcaacgagccgggaacgtcaacatccaaactgaaaatgatttt ggcgcaacacaggagcttcgtctacggtcgagtcaacctcagtgtagtccatctgcccgt tcttttacgtcaatgagtgagcagttggaggtgaaatggtatgcaagtcctgaggagctc agggacgagacttgttcagtctcttcaaacatctatagtttgggtatccttcttttcgag ctgctcagtcaatttcaaagtgaaagagctcgtgaggctgcaatgtctgatatccgtcac cggattcttcctcccaagtttctgtcagagaatccaaaggaagctgggttctgtctctgg ttacttcatccagagccttcatgccgaccatcaaccagggatatcttgcagtctgaagtg gttaatggaattccagatttatatgctgaaggcttgtcgttagctattgaacaagaggac acggagtctgaactgttacagcatttcctcgttttgtcgcaagagcaaaggcagaagcat gctggaaatttgatggaagaaattgtgtccttggaagcagatattgaagaaattgtgaag agacgttgtgccataagtcctgtgtctgtgggagaagcttctagctcatcgcttgcttca agtgtaccagaaaagagactggtcaccaacattaaacaacttgaaagcgcttatttcgga gcaaggatagatgtacatctccctgaagcacgttataggttacgcccggatagggatctg ctaagaaatcgtgatgagagtgttatatcagaacatgaaaatagtgagacgtggagctca gatgatcgtgttggagcgttctttgatggactgtgcaaatatgctcgatatagcaagttt gaaactcgaggtgttctgaggaccggggagttgaacaacacttcaaatgtgatttgttct ctggggtttgatcgggacgaagattattttgctacggctggtgtttcaaagaaaatcaag atatttgagttcagttccctattcaacgaatctgtggacatccattatccagccgtggaa atgtcaaatagatcaaagcttagcggcgtttgctggaacaactatatcaggaactactta gcatcctctgattatgatggtatcatcaagttatgggatgtgacaacaggacaggccatt tcacatttcatagagcacgagaagcgggcctggtctgttgatttctctgaagcgtgtccg acaaaattagccagtggaagcgatgattgttctgtgaagctgtggaacatcaacgagagg aattgcttaggaacgatcaggaacattgcaaacgtctgttgtgtgcaattttctccacag tcgtctcatctgctagcctttggatcatcagatttcagaacatactgctacgatacacgg aacttaagaactccttggtgcatactgtcaggacacaacaaagcagttagctacgccaaa ttcttggatagtgaaacccttgtcacagcgtcaactgataacacgttaaagctttgggat cttaagaaaactactcacggtggcctctccacaaatgcttgcagcttaacttttggtggc catacgaacgagaagaactttgttgggttgtctactgccgatggatatatagcttgtggc tcagagacaaatgaggtttatgcatatcaccgctctcttccaatgcccattaccgcatac aagtttggttcgattgatcctataacagggaaggagattgaggaagacaacaacctattt gtttcaagcgtttgctggagaaaaagatcaaatatggttgtttcagctagctcaaatggg tctatcaaagttctacagctggtttga

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