KEGG   Raphanus sativus (radish): 108828093
Entry
108828093         CDS       T06014                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    108828093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108828093
   03029 Mitochondrial biogenesis [BR:rsz03029]
    108828093
Membrane trafficking [BR:rsz04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    108828093
 Others
  Specific organelles associated proteins
   Auto phagosome
    108828093
Mitochondrial biogenesis [BR:rsz03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108828093
SSDB
Motif
Pfam: WD40_Prp19 WD40 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ATG16 WDR90_beta-prop_4th Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NWD2_C NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_VPS8 WDR54 Ge1_WD40 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR19_1st WD40_RFWD3 eIF2A Beta-prop_Vps41 Beta-prop_NUP159_NUP214 PQQ_2 Cytochrom_D1 WD_LRWD1 Beta-prop_IP5PC_F SlyX Beta-prop_RIG_1st INO80E DUF745
Other DBs
NCBI-GeneID: 108828093
NCBI-ProteinID: XP_018457155
UniProt: A0A6J0LAD4
LinkDB
Position
9:13219986..13222258
AA seq 509 aa
MSQEEKAKEAIKDALRALRKRHLLEEGAHGPAISALSKPMISQGSEWKEKTEKLELELQQ
CYKAQSRLSEQLVIEVAESRTSKASLQDKELLINDLEKDLSHTREECTRLQEELAEKTKT
LDLLITENKQVRSHLEEMTNRAQKAESENKMLIDRWMLQKMQDAERLNEANALYEEMLAK
LKANGLENLARQQVDGIVRRNEDGTDHFVESTVPSTCGHRIHAHEGGCGSILFEYNSRTL
FTGGQAGPVKMWDTNSGSQIKSLHGSLGNILDLAITHDNKSLIAASSSNNLFVWDVNSGR
VRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLQKGYCTNTVLFTSNCNAICLS
IDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNMILTSGRDNVHNLF
DTRTLEICGTLRASGNRLASNWSRSCISPDDEYVAAGSADGTVHVWSISKGNIVTTLKEQ
TSPILCCSWSGIGKPLASADKNGYVCTWT
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcacaggaggagaaagcaaaagaagccataaaagacgctttgagagctttgcggaag
cgccatcttctggaagaaggagctcatggccccgccatttctgcgctctctaaacctatg
atttctcagggatcagaatggaaggagaaaacagaaaaactggaattggagctacagcaa
tgttacaaggcgcaatcccgactgtctgaacaactcgtgatagaagtagctgaatccaga
acttcgaaggcttctttacaagacaaggagttgttgattaatgacctggagaaggactta
tcccatacaagggaggagtgtacacggttacaagaagagttagcggagaagaccaagacg
cttgatttacttattactgaaaacaagcaagtgcgatctcacctggaggagatgacaaac
agagctcaaaaagcagagtctgagaacaaaatgttaatcgatcggtggatgttacagaag
atgcaggatgcagaacgtcttaatgaggcaaatgctctctatgaagaaatgctagctaag
cttaaggccaatggtttggaaaatcttgctaggcagcaagttgatggaatagtccgacgc
aatgaagatggaaccgatcattttgttgagtcaaccgttccgtcaacatgtggccaccgt
atccatgctcacgaaggtggctgtggttccatactctttgaatacaactctcgtactctg
ttcaccggtgggcaagccggaccggtgaaaatgtgggacaccaatagtgggtctcagatc
aaaagcttacacggttcgcttgggaacatacttgatctagccataacccacgacaataag
tccctgatcgcagcaagcagctctaacaatttgtttgtgtgggatgtgaactctggtagg
gtacgtcatacgctcacaggccacacggataaagtatgtgctgtggatgtgagcaagttc
tcgagcagacatgttgtcagtgcagcttatgaccgtactattaaactctgggatttgcag
aaaggttactgtactaacaccgtactctttactagtaactgcaacgcgatctgcctcagc
atagatggcctcacggtattctctggccacatggatgggaatcttaggttatgggatatt
caaactgggaaacttctgtctgaagtagctggacactcttctgctgtgacctctgtatcc
ttgtcccggaatgggaatatgatcttgacgagcgggagagacaacgtgcataacttattc
gatacacggactttggaaatttgcgggacgttgagagcatcagggaacagattggcatcg
aattggagccggtcgtgtataagtccggatgatgaatacgtggctgcgggatctgcggac
ggaacggtgcatgtctggtctatatccaaaggcaatatagtgaccactctcaaggagcaa
acatctcctatactgtgttgttcttggagtgggatcggtaaaccattggcatcggctgat
aaaaacgggtatgtctgtacctggacataa

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