KEGG   Raphanus sativus (radish): 108828162
Entry
108828162         CDS       T06014                                 
Name
(RefSeq) E3 ubiquitin ligase PQT3-like
  KO
K10624  E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108828162
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108828162
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  U-box type E3
   108828162
SSDB
Motif
Pfam: DWNN zf-CCHC_2 U-box zf-C3HC4_2 zf-C3HC4
Other DBs
NCBI-GeneID: 108828162
NCBI-ProteinID: XP_018457257
UniProt: A0A6J0LAZ0
LinkDB
Position
9:33253586..33259588
AA seq 885 aa
MAIYYKFKSARDYDTIAMDGPFISVGILKDKIFETKHLGSGKDLDIVLSNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRITVITAQEPRIENKVEHVQAETSNSHVAEPSTAKYPEDEF
DEFGNDFYSIPAVHGQGAQHNNPCHVLAPTEEKVDEESKLQALIDTPALDWQRQGQDNFG
TGRGYGRGMNGRMGGRGFGMERKTPPPGYICHRCNVPGHLIQHCPTNGDPTYDVKRVKPP
TGIPKSMLVATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLPSTTRSVGELPPELKCPLCK
EVMKDAALTSKCCFQSFCDKCIREHIISKSKCVCGETDVLADDLLPNKTLRDTINRILEA
GNDSVENAGSVGHITDLESARCLPPPKGRSPATSAASKGEKKPAHSNNNDAPTVKLPTEI
ADITSAPRASAEDKVEKPVDACESTQGSVAVKEATTVSKMNTQAPKEEVQQQVAAGEPAK
KKKKKPKVPGTDMQWNHVPDLAGPDYNMMQMGPGPGPQYFNGMQPGFNGFHPGFNGFPGP
FPGQMPPFMGYGINPMDMAFGRGMNMMHPDPFAAQAFGFPNIPPPHRDLAELGNRMNLQR
AMMGRDEVEARKAEMLRKRENERRTEGGKVFRDGENSRMMVMMNNGTSGSASSINPNKSR
QAPPPPHPEYDRRRRPERLSPEHPPPRKSKSPSRDSKRKYERYPEERDHRQRDRERSSRH
QDLDREHDHHRTRDRRDEDRSRDHHRHSHRDPERNQHHHRKRSEPPPPSEPTAATKSEME
KSSVFARISFPEEEASSKRRKVSSSSSASVMTEPHVVSVGTSSIHRNNSRKEMEVVAEYE
SSDEDRHFKRKPSRYERSPPVVVTDVSDDKHRYSKRGGKGERSRA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggcaatttattacaagtttaagagtgcaagggattacgataccatcgccatggatggt
ccttttatatcagtcggtattctcaaagacaaaattttcgaaactaagcatttgggcagt
ggtaaagaccttgatattgtcctctccaatgcccaaactaacgaagagtatctggatgaa
gcgatgctaataccaaagaatacatctgttctaattcgccgagtcccaggacgccctcgc
atcacagttattaccgcacaagagcctagaatcgagaataaagtggaacatgttcaggct
gaaaccagcaattctcatgttgctgaaccatctacagcgaaataccctgaagatgagttt
gacgaatttgggaatgatttttactctattcctgctgtccacggtcaaggtgcccagcat
aataatccatgtcatgttcttgcaccaacagaggagaaagtagatgaagaaagcaaactt
caggcgttgattgacaccccagcacttgactggcagagacaaggtcaagataattttggg
acagggagaggttacggaaggggtatgaatggaaggatgggtggacgtggttttggaatg
gaaaggaaaactccacctccaggatatatttgtcaccgttgcaatgtccctggacattta
attcagcattgccccacaaatggtgaccctacctatgacgttaagagagttaaaccacct
actggtatccccaagtccatgttggtggcaacccctgatggttcttactcgttgccaagt
ggtgcagttgcagttcttaaaccaaatgaggatgcttttgagaaggaaatggagggattg
ccatcaacaacacgctctgtaggagaacttcctcctgagctaaaatgtccgctatgcaaa
gaagtaatgaaagatgctgcgcttacaagcaaatgttgtttccagagtttctgtgacaag
tgtatcagagaacacattatttcaaagtcaaagtgtgtgtgtggagaaactgatgtactt
gctgatgatcttctaccaaacaaaacgctaagggataccataaaccgtatcttggaagcc
ggaaacgatagcgttgagaatgctggcagcgtggggcatatcacagatttggagtctgca
cgctgtcttcctcctcccaagggtcgatctcctgctacatctgctgcatctaaaggcgag
aagaaaccagctcatagtaacaacaacgatgctccgacagtaaagctgccaacggaaatt
gcagatatcacaagtgcccctcgggcatctgcagaagataaagtggaaaagccagtggat
gcgtgtgaaagcactcaagggtccgttgctgtgaaagaagcaacaacagtctcaaagatg
aatacgcaagctcccaaagaagaagtgcagcagcaggttgctgctggagagccagcaaaa
aagaagaaaaagaaacccaaagtgcctggaactgatatgcaatggaatcatgtgccggat
ctagcaggccctgactataatatgatgcaaatgggtccgggtccaggtccccagtacttc
aacggcatgcaacccggcttcaacggctttcatcccggcttcaatgggtttccaggccct
tttccgggccagatgcctccatttatggggtacggaataaacccgatggacatggcattt
ggtaggggtatgaatatgatgcatccagatccatttgctgcacaggcttttggattccct
aatataccaccacctcatagggacttagcggagttgggaaaccgtatgaatctccagcgt
gccatgatgggtagagacgaagttgaagctcgaaaagctgagatgttaagaaaacgggaa
aacgagagacgaaccgaaggtgggaaggtgtttagagatggagagaatagcagaatgatg
gtgatgatgaacaatgggacttcaggctctgcatcatccatcaaccctaacaaatctcga
caagcgcctccaccaccgcatccggaatacgaccgccgcagacggccagagagattatct
cccgagcacccgccgccgcgtaagtcaaagtctccgtctcgagattccaagagaaaatac
gaacgctatcccgaggaacgtgatcatcggcaacgcgaccgcgaaaggtcgtcccgtcac
caagacctagatcgcgagcacgaccaccaccgcactcgcgatcgccgcgacgaagataga
agccgagaccaccaccgtcacagccaccgagatccggagcgtaaccagcaccaccaccgt
aaacgatctgaacctcctccgccgtcggagccaaccgccgcgactaagtcggagatggag
aagtcgagcgtgttcgctcgtataagctttccggaggaagaagcttccagcaaacgaagg
aaggtatcttcgtcgtcttctgcttccgtgatgacggagccgcatgttgtgtccgtgggg
acatcatcaatccatcgtaacaacagtcggaaggagatggaggtggtggcagagtatgag
tcgagcgacgaagacaggcatttcaagaggaagccgtcaaggtacgagagatctccaccg
gtggtggttactgatgtgagtgatgataagcatcgatactcgaaacgcggcggcaaggga
gagagatctcgagcttaa

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