Raphanus sativus (radish): 108828162
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Entry
108828162 CDS
T06014
Name
(RefSeq) E3 ubiquitin ligase PQT3-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108828162
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108828162
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
U-box type E3
108828162
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108828162
NCBI-ProteinID:
XP_018457257
UniProt:
A0A6J0LAZ0
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Position
9:33253586..33259588
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AA seq
885 aa
AA seq
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MAIYYKFKSARDYDTIAMDGPFISVGILKDKIFETKHLGSGKDLDIVLSNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRITVITAQEPRIENKVEHVQAETSNSHVAEPSTAKYPEDEF
DEFGNDFYSIPAVHGQGAQHNNPCHVLAPTEEKVDEESKLQALIDTPALDWQRQGQDNFG
TGRGYGRGMNGRMGGRGFGMERKTPPPGYICHRCNVPGHLIQHCPTNGDPTYDVKRVKPP
TGIPKSMLVATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLPSTTRSVGELPPELKCPLCK
EVMKDAALTSKCCFQSFCDKCIREHIISKSKCVCGETDVLADDLLPNKTLRDTINRILEA
GNDSVENAGSVGHITDLESARCLPPPKGRSPATSAASKGEKKPAHSNNNDAPTVKLPTEI
ADITSAPRASAEDKVEKPVDACESTQGSVAVKEATTVSKMNTQAPKEEVQQQVAAGEPAK
KKKKKPKVPGTDMQWNHVPDLAGPDYNMMQMGPGPGPQYFNGMQPGFNGFHPGFNGFPGP
FPGQMPPFMGYGINPMDMAFGRGMNMMHPDPFAAQAFGFPNIPPPHRDLAELGNRMNLQR
AMMGRDEVEARKAEMLRKRENERRTEGGKVFRDGENSRMMVMMNNGTSGSASSINPNKSR
QAPPPPHPEYDRRRRPERLSPEHPPPRKSKSPSRDSKRKYERYPEERDHRQRDRERSSRH
QDLDREHDHHRTRDRRDEDRSRDHHRHSHRDPERNQHHHRKRSEPPPPSEPTAATKSEME
KSSVFARISFPEEEASSKRRKVSSSSSASVMTEPHVVSVGTSSIHRNNSRKEMEVVAEYE
SSDEDRHFKRKPSRYERSPPVVVTDVSDDKHRYSKRGGKGERSRA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattacaagtttaagagtgcaagggattacgataccatcgccatggatggt
ccttttatatcagtcggtattctcaaagacaaaattttcgaaactaagcatttgggcagt
ggtaaagaccttgatattgtcctctccaatgcccaaactaacgaagagtatctggatgaa
gcgatgctaataccaaagaatacatctgttctaattcgccgagtcccaggacgccctcgc
atcacagttattaccgcacaagagcctagaatcgagaataaagtggaacatgttcaggct
gaaaccagcaattctcatgttgctgaaccatctacagcgaaataccctgaagatgagttt
gacgaatttgggaatgatttttactctattcctgctgtccacggtcaaggtgcccagcat
aataatccatgtcatgttcttgcaccaacagaggagaaagtagatgaagaaagcaaactt
caggcgttgattgacaccccagcacttgactggcagagacaaggtcaagataattttggg
acagggagaggttacggaaggggtatgaatggaaggatgggtggacgtggttttggaatg
gaaaggaaaactccacctccaggatatatttgtcaccgttgcaatgtccctggacattta
attcagcattgccccacaaatggtgaccctacctatgacgttaagagagttaaaccacct
actggtatccccaagtccatgttggtggcaacccctgatggttcttactcgttgccaagt
ggtgcagttgcagttcttaaaccaaatgaggatgcttttgagaaggaaatggagggattg
ccatcaacaacacgctctgtaggagaacttcctcctgagctaaaatgtccgctatgcaaa
gaagtaatgaaagatgctgcgcttacaagcaaatgttgtttccagagtttctgtgacaag
tgtatcagagaacacattatttcaaagtcaaagtgtgtgtgtggagaaactgatgtactt
gctgatgatcttctaccaaacaaaacgctaagggataccataaaccgtatcttggaagcc
ggaaacgatagcgttgagaatgctggcagcgtggggcatatcacagatttggagtctgca
cgctgtcttcctcctcccaagggtcgatctcctgctacatctgctgcatctaaaggcgag
aagaaaccagctcatagtaacaacaacgatgctccgacagtaaagctgccaacggaaatt
gcagatatcacaagtgcccctcgggcatctgcagaagataaagtggaaaagccagtggat
gcgtgtgaaagcactcaagggtccgttgctgtgaaagaagcaacaacagtctcaaagatg
aatacgcaagctcccaaagaagaagtgcagcagcaggttgctgctggagagccagcaaaa
aagaagaaaaagaaacccaaagtgcctggaactgatatgcaatggaatcatgtgccggat
ctagcaggccctgactataatatgatgcaaatgggtccgggtccaggtccccagtacttc
aacggcatgcaacccggcttcaacggctttcatcccggcttcaatgggtttccaggccct
tttccgggccagatgcctccatttatggggtacggaataaacccgatggacatggcattt
ggtaggggtatgaatatgatgcatccagatccatttgctgcacaggcttttggattccct
aatataccaccacctcatagggacttagcggagttgggaaaccgtatgaatctccagcgt
gccatgatgggtagagacgaagttgaagctcgaaaagctgagatgttaagaaaacgggaa
aacgagagacgaaccgaaggtgggaaggtgtttagagatggagagaatagcagaatgatg
gtgatgatgaacaatgggacttcaggctctgcatcatccatcaaccctaacaaatctcga
caagcgcctccaccaccgcatccggaatacgaccgccgcagacggccagagagattatct
cccgagcacccgccgccgcgtaagtcaaagtctccgtctcgagattccaagagaaaatac
gaacgctatcccgaggaacgtgatcatcggcaacgcgaccgcgaaaggtcgtcccgtcac
caagacctagatcgcgagcacgaccaccaccgcactcgcgatcgccgcgacgaagataga
agccgagaccaccaccgtcacagccaccgagatccggagcgtaaccagcaccaccaccgt
aaacgatctgaacctcctccgccgtcggagccaaccgccgcgactaagtcggagatggag
aagtcgagcgtgttcgctcgtataagctttccggaggaagaagcttccagcaaacgaagg
aaggtatcttcgtcgtcttctgcttccgtgatgacggagccgcatgttgtgtccgtgggg
acatcatcaatccatcgtaacaacagtcggaaggagatggaggtggtggcagagtatgag
tcgagcgacgaagacaggcatttcaagaggaagccgtcaaggtacgagagatctccaccg
gtggtggttactgatgtgagtgatgataagcatcgatactcgaaacgcggcggcaaggga
gagagatctcgagcttaa
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