Raphanus sativus (radish): 108828247
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Entry
108828247 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108828247
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108828247
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108828247
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
DUF7885
LRR_6
LRR_At5g56370
F-box
F-box-like
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
108828247
NCBI-ProteinID:
XP_018457375
UniProt:
A0A6J0LB24
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Position
9:complement(639186..641022)
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AA seq
559 aa
AA seq
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MDLPEECWELIFRFIDEDDHRFLESLTLVSTSFLSITNRVRSTFTVTDRTLPSLHRHLLR
FHNLKRVRFHDFHGDIDSVLLQLSLSCSDLESLDISGMPYFPDFSKSGKMMTNVKEFSCS
GVMELREIDLVSIGVCFPSLQRLDISYPASLPIPVSDSAIISLSSNLKSLLTINVSGNNL
ITDKSLVSLSRNCVLLREIIFRDCDFVSSRCIEFVLRNSRYLESLAIDGIGWRPRESFSK
DAFLFSRCLSELDLSDSFLSDELLRLIADANLPLKKLVLSGSQCLTFDGVLYLLTKYRTL
LHLNLEGLSFLSDEMIMELAVFLGRLTFVNLSFCAKLTGVSFFYIIERCVSLECLKMEAT
NFGVEDDSKELGVMSRIKSLYLSGNHNLRDECLVKISRHCPFVKTLEVDHCPAITGDGIL
EVLRNCGQLTSLDISGCTAIRSFDALDFELPKLESLRACGTWIDDQALGLITKRCPRLLR
LDLKGCLNVRSRGMKEVVQSCTRLREINLANCQVDDGIFIWMVCANPSLRKIVPPCWFSP
TKKLHKFFLCHGCVICQDP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgaagaatgctgggagctgatctttagattcatcgacgaagacgaccac
cgattcctcgaatctctcaccctcgtatccacctcattcctctccatcaccaaccgcgtt
cgctccaccttcaccgtcaccgatcgcactctcccctctctccatcgccacctccttcgc
ttccacaacctcaagcgagtcaggttccatgactttcacggagatatcgactccgtcctc
ctccaactctccctttcctgttcagatttggaatcgctcgatatctcgggaatgccctac
tttccagatttctcgaaatcggggaagatgatgaccaacgtgaaggagtttagctgctcc
ggagttatggagctccgagagatcgatctcgtttcgatcggagtgtgtttcccgtctctt
cagaggctggacataagctaccctgcgtctcttccaatccccgtctctgattctgccatc
atcagcctctcttcgaatctcaagagcctgttgacgatcaacgtctctggtaacaatctc
atcacggataagtctctggtctctctgtcccggaactgtgtcctcttgagagaaatcatc
ttccgtgactgcgatttcgtttcgtctcgttgcatcgagttcgttctgcgtaattctcgt
tacctggagtctcttgccatcgacggaatcggatggaggccgagggagtctttctccaag
gacgcattcttgttctcccgttgtttgtctgagcttgatctatcggattcgtttctatca
gatgagttgcttcgtttgattgccgacgccaatcttcctctgaagaagcttgttctctcc
ggttctcagtgtctcacttttgatggggtcttgtatttgctgaccaagtaccggacttta
cttcacttgaatcttgagggattgagcttcctctctgatgagatgattatggaactggcg
gtgttccttgggaggttaacctttgttaacctaagtttctgtgccaagttaactggtgtg
tcattcttctacatcattgaaagatgtgtttccctcgagtgtttaaaaatggaagcgacg
aattttggagtggaagacgattccaaggaactgggtgtcatgtcaaggatcaagtctttg
tacctatccggaaaccacaatttgagagatgagtgtctcgtcaagatatcacgccattgt
ccttttgtaaaaactcttgaagtggatcattgtcctgccatcactggagatgggattctt
gaagttttgaggaattgtggccagcttacatctttggatataagcggatgcactgccata
aggagctttgatgcactagactttgagcttccaaagctggagagtttacgagcatgtgga
acttggatcgacgaccaagccctgggtttgatcaccaaaagatgtccaaggttgttgcgt
cttgatctgaaaggatgcttgaacgtgagatcaagagggatgaaggaagttgtgcagagc
tgcacacgtttaagagagataaaccttgcaaactgtcaagtcgatgatggaattttcatt
tggatggtttgtgctaatccatctcttaggaaaattgtgccgccttgttggttttctcca
actaaaaaactacacaaattctttctatgccatggatgtgtgatctgccaagatccatag
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