Raphanus sativus (radish): 108828474
Help
Entry
108828474 CDS
T06014
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic
KO
K28146
NHL repeat-containing protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
108828474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
HAD_2
Hydrolase
Thioredoxin_8
Redoxin
TEN_NHL
SGL
AhpC-TSA
Hydrolase_like
Thioredoxin
DUF5128
HAD
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
108828474
NCBI-ProteinID:
XP_018457684
UniProt:
A0A6J0LDH2
LinkDB
All DBs
Position
9:34995736..35002275
Genome browser
AA seq
1056 aa
AA seq
DB search
MALKLYSSSPSLFFQSSRRFSSSINPIRSKPTKRSSSSFPGFRCVSPPPLPSWKVSVAAE
SPPSTTAEADDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTG
EAKFLGGVASVKGVKEFNPDAAKKRFFEIYLDKYAKPESGIGFPGALELVTECKNRGLKV
AVASSADRVKVDANLAAAGLSLSMFDAIVSADAFENLKPAPDIFLAASKILGVPTSECIV
IEDALAGVQAAQAANMRCIAVKTTLSEAVLKDAGPSMIRDDIGNISINDILTGGSDSTRN
PGKIHQENTASEKNNNNGFQGSRRDILRYGSLGIALSCVYFAANNWKAMQYASPQALWNA
LVGTKSPSFTQNQGEGRVQQFVDYIVDLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKG
KVVVLDFWTYCCINCMHVLPDLEFLEKKYADKPFTVVGVHSAKFDNEKDLDAIRNAVLRY
DISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALIYYG
GKNVLDSTPLPTRLEKDNDPRLAASPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLDGN
FIGQIGSTGEEGFRDGSFEDAAFNRPQGLAYNAKKNVLYVADTENHALRVIDFVNERVET
LAGNGTKGSDYQGGRKGTSQLLNSPWDVCYEPVKEKVYVAMAGQHQIWEYNVLDGVTKVF
SGNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGASRLLAGG
DPYFSENLFKFGDNDGVGAEVLLQHPLGVLCAKDGQIYLADSYNHKIKKLDPVTKRVVTI
AGTGKAGFKDGKVMAAQLSEPAGLALTENGRLFVADTNNSLIRYIDLNNKEDVEIRTLEL
KGVQPPMPKAKSLKRLRKRASADTKIVTVDAVTSREGDLNLKISLPDGYHFSKEARSKFV
VDVEPEDAVTVEPLEGILGPEGSTVLHYRQSSTSASIGKISCKVYYCKEDEVCLYQSVQF
EVPFKMESESSSSHVIAFTVKPRASDAGGLKLQATS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaactctactcctcctcaccttcacttttcttccaatcatcaaggagattc
tcttcttcgattaatccaattagatcaaaacccacgaaaagatcatcatcttcctttcca
ggattccgctgtgtttctccgcctcctttaccgtcctggaaagtgagtgttgctgcggag
agccctccgtcgacgacggcagaggcggatgattgggggaaggtatccgcggtgctattc
gatatggacggtgtgctttgcaacagcgaggatctctcgagacgagccgcagtggatgtc
ttcaccgagatgggagttgaagtcaccgtagatgacttcgtccctttcatgggaacaggt
gaagctaagttcttaggaggtgttgcttctgtgaaaggagtaaaagagtttaatcctgat
gcagctaaaaagcgcttctttgagatttatctcgataagtacgcgaagccagagtctgga
attggatttcctggagcacttgagcttgttactgagtgtaagaacagaggtctcaaagtc
gctgttgcctctagcgccgaccgtgtcaaagttgatgcaaaccttgcagccgctggtttg
tctttgtccatgtttgatgcaattgtatcagcagacgcatttgagaacttgaaaccagct
ccagatattttcttggctgcttccaagatcttgggtgtgcccacaagcgagtgtattgtt
attgaggatgcacttgctggagtccaggctgctcaagctgcaaacatgagatgcatagct
gtgaaaactactttatctgaagcagttcttaaggatgctggtccgtcaatgatccgagac
gatatcggaaacatatcaatcaatgacattctcactggtggctctgattctaccagaaat
ccaggaaaaatacatcaagagaacacagccagcgaaaaaaacaataacaacgggtttcag
ggttctcgtcgagatatactgaggtatgggagtcttggaattgctctttcttgtgtctac
ttcgccgcgaacaactggaaggcaatgcaatatgcttctccacaagctttgtggaacgca
ttggttggaacaaaaagcccttcttttacacagaaccaaggtgaagggagagtccaacag
ttcgtggattacattgtcgatctagagagcaagcaaacagctacaactgttccagaattc
ccatctaaactcgattggcttaacactgcccctctccagtttcgccgggatctgaaaggg
aaagtggtggtacttgatttttggacttactgctgcataaactgtatgcatgtattacca
gatcttgagtttcttgagaagaagtatgcggacaagccatttactgttgtgggtgtacac
tcggctaagttcgacaacgagaaggacttagatgccatacgaaatgcagtcctacgctat
gatatcagtcacccggttgtgaacgatggagacatgtacatgtggagagagctgggcatc
aactcgtggcctacatttgctgttgtctcaccaaatggtaaagtcattgcacagattgcc
ggagaaagtcaccgcaaagatcttgatgacttggtggcagcagctctaatatactatggt
gggaagaatgttttagacagcactccgcttcctacacgtttggagaaagataatgatccg
cgcttggccgcgtctccattaaaattcccagggaagctggccattgatactcttaacaac
aggctgtttatctcagacagtaaccataaccgcattatcgtaactgatcttgacgggaat
ttcatcggccaaatcggcagtaccggagaagaaggcttccgtgatggttcctttgaagat
gctgcattcaatcgtcctcagggacttgcttataatgcaaagaagaatgttctttatgtt
gctgataccgagaaccatgctttgagggtgattgattttgtcaacgagagagtggagact
ctggctggtaatggaactaaaggctcagattaccaaggtggaagaaaaggaacctcacag
cttttgaattctccttgggatgtatgctatgagccagtgaaagagaaggtctacgttgca
atggcgggtcagcaccagatttgggaatacaatgtgcttgatggtgttactaaagtgttc
agtgggaatggctatgaaagaaaccttaatggttctacccctcaaacgacatcgtttgct
cagccttcaggaatctcattaggccctgatttgaaggaagcatatattgctgatagcgag
agcagttctattcgtgcccttgatcttcaaactggagcatcaagattgctcgctggtggt
gatccttatttctctgagaatcttttcaagtttggagataatgacggtgtgggagcagaa
gtgctcctgcaacatccacttggtgtgttatgcgcaaaggatggccaaatatatctagct
gatagctacaaccacaagattaagaagctggaccctgtgaccaaacgtgttgttactatc
gctgggacaggaaaagccggtttcaaagatgggaaggtgatggctgctcagctttcagag
cctgcaggacttgctctaactgaaaacgggaggctttttgttgcggatacaaacaatagt
cttatacgatacatagatttgaacaacaaagaagatgtagagattcgtacactggagtta
aaaggcgttcaaccgccaatgccaaaggcaaaatccttgaaacgtttgaggaaacgtgcc
tcggccgatacaaagattgtcacagtggatgctgttacatctcgtgaaggagatttgaat
cttaaaatctcattaccagatggctaccatttctccaaggaagcgcggagtaagtttgtg
gttgatgttgagcctgaagacgcagtaacggtcgaaccattggaaggaatccttggccct
gaaggttctacggtgcttcattatagacaatcttcaacttctgcttctattggaaaaatc
agttgcaaggtgtactattgcaaagaagacgaggtttgcttgtaccagtctgttcagttt
gaggtacctttcaagatggaatcagaatcatcttcttctcacgtgatcgcattcaccgtt
aaacctagagcatcagatgctggcggcttaaagcttcaagctactagctga
DBGET
integrated database retrieval system
