Raphanus sativus (radish): 108828494
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Entry
108828494 CDS
T06014
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00500
Starch and sucrose metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108828494
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
108828494
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Radical_SAM
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
108828494
NCBI-ProteinID:
XP_018457712
UniProt:
A0A6J0LCA1
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Position
9:complement(2831720..2836389)
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AA seq
901 aa
AA seq
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MSTVPIETLLHHSPLRHASLNGATGFFFSPSSLNLRCHFASKKLHSIGRRSIVVSGNSLG
ERRRSVAVRASSSDTAVVETTSRSDDDVIFKQDFPVERIDKAEGKISVRLKQAKENKWEL
SVGCSLPGKWILHWGVSYVGDTGSEWDQPPEDMRPPGSVSIKDYAIETPLGKLSEGDSFH
EVTINLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLLDDVPDDGNLIGSKKGFGALG
KLSNIVVKPDEPSADVQEKGTSSSGSTKERKGLEEFYEEMPISKHVAGDNSVSVTAKKCP
ETSKNIVSIETDLPGDVTVHWGVCKNGSKKWEIPAEPYPEETSLFKNKALRTRLQRKDDG
NGSFGLFSLDGKLEGLCFVLKLNENTWLNNRGEDFYVPFLTSTSLPVESEAAQVSEKTPK
TNQEVSESGFTDEIITEIRNLAIDISSHKSQKRNVKEVQINILQEIEKLAAEAYSIFRST
TPTFTPESVLEAEVEEPEIKISSGTGTGFEILCQGFNWESHKSGRWYQELQEKADELASL
GFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKETVKKFHKVGIKVLGDAVLNHR
CAHFKNSNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKD
IKEWLCWMREEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMDYN
QDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPQGKPPGVVGWWPSRA
VTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFFDHIYSDYRSEISSLLSLRN
RQKLHCRSEVNIVKSERDVYAAIIDEKVAMKIGPGHYEPPSGSQNWSVAVEGRDYKVWET
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttcccattgaaactcttctccaccactctccacttcgccacgcctctcta
aacggagctacaggcttcttcttctccccttcctcgttgaatctccgttgtcatttcgct
tccaagaagctacactcgatcggacgaagaagcatcgtcgtctctggaaacagcttaggt
gagcgtagaaggtccgtcgcggttcgagctagctcctccgatacagctgttgtcgaaaca
acctctcgatcggatgatgacgtcatcttcaagcaggatttccccgtcgagcgaatcgat
aaggcagaaggaaagattagtgtgagattaaagcaagcgaaggagaataaatgggagctg
agtgttggatgtagtcttcctgggaaatggatccttcattggggtgtttcttatgttggt
gatactggcagtgaatgggatcaacctccggaagatatgagaccacctggctctgtttcc
atcaaggactatgccattgagacacctttggggaagttatcagaaggagattcatttcat
gaagttactattaatcttaatctggaaagctctgtagcagctctcaattttgttttgaag
gatgaagaaactggggcgtggtatcagcacaaagggagagactttaaggttcctcttctg
gacgatgttcctgatgatggaaacttgatcggatcaaagaaaggcttcggtgctcttggg
aagctctcaaacattgttgtcaaaccagatgagcctagtgcagatgttcaagaaaaaggg
acgagttcttctggttctacaaaagaaagaaaaggtcttgaagagttttatgaggagatg
ccaattagtaagcatgttgccggtgataactcagtcagtgtcactgcaaagaaatgccct
gaaacatcgaagaacattgtatcgatagaaactgatttaccgggagatgttactgtccac
tggggagtttgcaaaaatggcagtaaaaaatgggaaattccagctgaaccttacccagaa
gaaacatctttgtttaagaacaaggcattacgcactcgtttacagagaaaagacgatggg
aatggatcgtttggattattctctctggatggaaagctcgaaggattatgttttgtgctc
aagttaaatgaaaatacttggttaaataatagaggagaagacttctacgtccctttcctt
acttcaactagcttgcccgttgaatctgaagctgctcaagtgagtgagaagacaccaaaa
acaaatcaagaagtgtccgaaagtggattcactgatgaaatcatcactgagataaggaac
ttggcgattgacatttcctctcacaagagtcagaagaggaacgtaaaagaagtgcaaata
aacattctacaagaaattgagaaacttgctgcggaggcatatagcatattcagaagcaca
actccaacttttaccccggaaagtgtactagaagcagaggttgaagagcccgaaattaaa
atctcctcgggaactggcacaggatttgagatattgtgccagggattcaactgggaatcc
cataaatctgggagatggtaccaggagcttcaagaaaaagccgatgagctagcttcactt
ggattcactgttctgtggttacctccaccgacggaatctgtgtcacctgaagggtacatg
cctaaagacctgtacaacttgaattccagatatggaactattgatgagctaaaagaaacg
gtgaagaaatttcacaaagttgggatcaaagtgttgggagatgctgttttgaatcaccgc
tgtgcacatttcaagaattcaaatggtgtatggaatctatttggagggcgtctgaactgg
gatgatagggcagtagttgcagatgaccctcattttcagggtagaggcaacaagagcagt
ggagataatttccatgctgctccaaacatagatcactcacaggactttgttaggaaggat
atcaaggaatggctatgctggatgagagaagaagttgggtatgatggatggaggcttgat
ttcgtaagagggttctggggaggttacgtcaaagactacatggatgctagcaaaccctac
tttgcggttggtgaatactgggattccctaagttacacttatggagaaatggactacaat
caagacgcacatcgtcaaaggattgttgactggatcaatgcaactagtggagctgctggt
gcctttgatgtcacaaccaaaggaattcttcatacggcgcttcaaaaatgtgaatattgg
agactctcagacccacaagggaagccgcctggtgtagttggatggtggccatctcgtgct
gtaacattcatagagaatcatgatactggctctactcagggtcactggagattcccagga
gggaaggagatgcaaggatatgcttacatcttgactcatccaggaacaccagctgttttc
ttcgaccacatctactcagactaccgttccgagatttcttctcttctgtctctcaggaac
agacagaaacttcactgtcggagtgaggtgaacatagtaaagagtgagagagatgtgtat
gcggctataatagatgagaaagttgcaatgaagatcggaccagggcattacgaaccacca
agcggatctcaaaactggtctgtagccgttgaaggcagagactataaggtgtgggaaaca
tcttaa
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