Raphanus sativus (radish): 108828516
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Entry
108828516 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108828516
03036 Chromosome and associated proteins [BR:
rsz03036
]
108828516
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108828516
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Helicases
108828516
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108828516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108828516
NCBI-ProteinID:
XP_018457739
UniProt:
A0A6J0LDM8
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MPSLALSDKKKEEKKMKKKIDLETTTPEQQDSKKKGKKLKLSDSDGEESDKKEKEKKKSK
KKRKSSEVDEESEEEKKSSKKVKVDNPNAVSNFRISDPLKDKLKEKGIEALFPIQATTFD
MVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKRKNGYGRAPSVLVLLPTRELAK
QVYADFEAYGGSVGLTSCCVYGGDPYAPQEHKLKRGVDIVVGTPGRIKDHIERRNLDLTY
LQFRVLDEADEMLRMGFVDDVELILGKVEDPKKVQTLLFSATLPGWVQNIAARFLKQDKK
TIDLVGNDKMKASNSVRHIALPCNKQAMSRLIPDIISLYSSGGSTIIFTETKDQASELSG
LLPGARALHGDIQQSQREITMAGFRKGKFSTLVATNVAARGLDINDVQLIIQCEPPRDVE
DYIHRSGRTGRAGNTGVAVMLYDSRKSGVSRIEKQAGIKFEHVSAPQPNDIARAVGMEAA
EKITQVCDSVVPAFLAAAKELLESSGVSAEVLLAKALAKTAGFTEIKKRSLLTSMENHVT
LLFEAGKPIYTPSFVCGVLKRILPDDKANSIEGLTLTADGQAAVFDVAQSDVDQFIAAAR
KNASVSLEVVKELPKLQEREPAQRRFGRPGGGGQGFNNRGRGGSRFGRGGGRGGGQRW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattagcattatccgacaagaagaaagaggagaagaagatgaagaagaagata
gatttggagacgacgactccagagcagcaggactcgaagaagaaagggaagaagctgaaa
ctctcagattccgatggagaagagtctgataagaaggagaaggagaagaagaagagtaag
aagaagcgcaagtcttcagaggtagacgaagaatcagaggaagagaagaagagcagcaag
aaggtgaaagtcgataaccctaacgccgtctccaacttccgtatctctgatcccttgaag
gacaagcttaaggagaagggtatcgaggctctcttcccgattcaggcgacaacgtttgac
atggttctcgatggtgctgatctggtcggaagggctcgtactggtcagggtaaaacattg
gcttttgtgttgcctatactggagtcattgatcaatgggcctgcgaagagcaagaggaag
aatggttacggcagggcaccaagtgttttggttcttttaccaaccagagaattggccaag
caggtgtatgctgactttgaagcatacggaggatctgttgggttaacttcttgctgtgtc
tatggaggtgatccttatgcacctcaagagcataaactaaagagaggtgttgacattgtt
gttggaacccctggtcgtatcaaggatcatattgaaaggagaaaccttgacctgacttat
ctacagttccgtgttcttgatgaagctgatgagatgctgagaatgggattcgttgatgat
gttgaacttatcttagggaaggttgaggatcccaagaaagtccagacgcttctcttcagt
gccaccttgccaggatgggttcaaaacattgctgctaggtttcttaaacaagataagaag
actattgatcttgttggtaatgataagatgaaggcttctaatagtgttagacacattgct
cttccctgtaataagcaagccatgtctcgtttgattcctgatatcatcagcttatacagc
agtgggggtagtactatcattttcactgagactaaagaccaagcctctgagctttctggt
ctcttgcctggtgctagagctttgcatggtgacattcaacaatcacaacgtgagattact
atggctggatttagaaagggcaagttctctacattggttgctacaaacgtcgccgctcgt
ggtctagatatcaatgacgtgcagctaatcatccagtgtgagcctccacgtgatgttgaa
gactacatccaccgttcaggcagaacaggaagagctggcaacactggagttgcggtcatg
ctgtacgactctagaaaatccggcgtgtccaggatcgaaaagcaagccggtatcaaattc
gagcacgtttctgcgccgcagcctaatgatatcgccagagctgttggcatggaagcagcc
gagaagatcacgcaggtctgtgacagtgtggttcctgcttttttggctgctgccaaagag
ctcttggaaagctccggtgtatcagcagaagtgctcctcgctaaagctcttgcaaaaacc
gcgggcttcactgagatcaagaaaaggtcgcttttaacatcgatggagaatcatgtcacg
ttgctttttgaagcagggaaacctatttacactccatcatttgtatgtggtgtactgaag
agaatcttaccggatgacaaggctaattcgatcgaagggttgactctaacagcagatgga
caagctgctgtgttcgatgttgcgcagtcagatgtagaccagttcattgcagctgcgcgg
aagaatgcgagtgtgagcttggaggttgtcaaggagttgcctaagcttcaagagagggag
cctgcgcagagaagatttggccgcccgggtggtggtggccaagggtttaataatcgtggc
agaggaggtagtagatttggtcgtggtggtggtcgtggtggaggccagagatggtga
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