Raphanus sativus (radish): 108828566
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Entry
108828566 CDS
T06014
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00500
Starch and sucrose metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108828566
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
108828566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Radical_SAM
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
108828566
NCBI-ProteinID:
XP_018457801
UniProt:
A0A6J0LE97
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MSTVPIEPLLHHSPLRHASLNGARGFFFSPSSLNLRSHFASKKLHSIGRRSIVFSGNSLG
HFSSEERIRSVAIRASSSDTAVVETTSRSDDDVIFKQNFPVERIDKAEGKIYVRLKQGKE
NRWELSVGCSLPGKWILHWGVSYLGDTGSEWDQPPEDMRPPGSVAIKDYAIETPLGKLSE
GDSFHEVTVNLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLLDDVPDDGNLIGSKKG
FGALGKLSNIVVKPDETDADVQKKGKSSSGTTTTKERKGLEEFYEEMPISKHVAGDNSVS
VTARKCPETSKNIVSIETDLPGDVTVHWGVCKNGSKKWEIPAEPYPEETSLFKNKALRTR
LQRKDDGNGSFGLFSLDGELEGLCFVLKLNENTWLNNRGEDFYVPFLTSTSLPVESEAAQ
VSEKTPKTNQEVSESGFTDEIITEIRNLAIDISSHKSQKRNVKEVQINILQEIEKLAAEA
YSIFRSTTPTFTPESVLEAEVEEPEIKISSGTGTGFEILCQGFNWESHKSGRWYQELQEK
ADELASLGFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKETVKKFHKVGIKVLG
DAVLNHRCAHFKNSNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHS
QDFVRKDIKEWLCWMREEIGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYT
YGEMDYNQDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPQGKPPGVV
GWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFFDHIYSDYRSEIS
SLLSLRNRQKLHCRSEVNIVKSERDVYAAIIDEKVAMKIGPGHYEPPSGSQNWSVAVEGR
DYKVWETS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttcccattgagcctcttctccaccactctcctcttcgccacgcctctcta
aacggagctagaggcttcttcttctccccttcctccttgaatctccgttctcatttcgct
tccaagaagctacactcgatcgggagaagaagcatcgtcttctccggaaacagcttaggt
catttcagctcggaggagcgtataaggtccgtcgcgattcgagccagctcctccgatact
gccgtcgtcgaaacaacctctcgatcggatgatgacgtcatcttcaagcagaatttcccc
gtcgagcgaatcgataaggcagaaggaaagatatatgtgagattgaagcaagggaaggag
aataggtgggagctgagtgttggatgtagtcttcctggcaaatggatccttcattggggt
gtttcttatcttggtgatactggcagtgaatgggatcaacctccggaagatatgagacca
cctggctctgttgccatcaaggactatgccattgagacacctttggggaagttatcagaa
ggagattcatttcatgaagttactgttaatcttaatctggaaagctctgtagcagctctc
aattttgttttgaaggatgaagaaactggggcgtggtatcagcacaaagggagagatttt
aaggttcctcttctggatgatgttcctgatgatggaaacttgatcggatcaaagaaaggc
ttcggtgctcttgggaagctctctaacattgttgtcaaaccagatgagactgatgcagat
gttcaaaaaaaagggaagagttcgtctggtactacgactacgaaagaaagaaaaggtctt
gaagagttttatgaggagatgccaattagtaaacatgttgccggtgataactcagtcagt
gtcactgcaaggaaatgccctgaaacatctaagaacattgtatcgatagaaactgattta
ccgggagatgttactgtccactggggagtttgcaaaaatggcagtaaaaaatgggaaatt
ccagctgaaccttacccagaagaaacatctttgtttaagaacaaggcattgcgcactcgt
ttacagagaaaagacgatgggaatggatcgtttggattattctctctggatggagagctc
gaaggattatgttttgtgctcaagttaaatgaaaatacttggttaaataatagaggagaa
gacttctacgtccctttccttacttcaactagcttgcccgttgaatctgaagctgctcaa
gtgagtgagaagacaccaaaaacaaatcaagaagtgtccgaaagtggattcactgatgaa
atcatcaccgagataaggaacttggcgattgacatttcctctcacaagagtcagaagagg
aacgtaaaagaagtgcaaataaacattctacaagaaattgagaaacttgctgcggaggca
tatagcatattccgaagcacaactccaacttttaccccggaaagtgttctagaagcagag
gttgaagagcccgaaatcaaaatctcctcgggaactggcacaggatttgagatattgtgc
cagggattcaactgggaatcccataaatctgggagatggtatcaggaacttcaagaaaaa
gccgatgagctagcttcacttggattcactgttctgtggttacctccaccgacggaatct
gtgtcacctgaagggtacatgcctaaagacctgtacaacttgaattccagatatggaact
attgatgagctaaaagaaacggtgaagaaatttcacaaagttgggatcaaagttttggga
gatgctgttttgaatcaccgctgtgcacatttcaagaattcaaatggtgtatggaatcta
tttggaggacgtctgaactgggatgatagggcagtagttgcagatgaccctcattttcag
ggtagaggaaacaagagcagtggagataatttccatgctgctccaaacatagatcactca
caggactttgttaggaaggatatcaaagaatggctatgctggatgagagaagaaattggg
tatgatggatggaggcttgattttgtaagagggttctggggaggttatgtcaaagactac
atggatgctagcaaaccctactttgcggttggtgaatactgggattccctaagttacact
tatggagaaatggactacaatcaagacgcacatcgtcaaaggattgttgactggatcaat
gcaactagtggagctgctggtgcctttgatgtcacaaccaaaggaattcttcatacggcg
cttcaaaaatgtgaatattggagactctcagacccacaagggaagccgcctggtgtagtt
ggatggtggccatcacgtgctgtaacattcatagagaatcatgatactggctctactcag
ggtcactggagattcccaggagggaaggagatgcaaggatatgcttacatcttgactcat
ccaggaacaccagctgttttcttcgaccacatctactcagactaccgttccgagatttct
tctcttctgtctctcaggaacagacagaaacttcactgtcggagtgaggtgaacatagta
aagagtgagagagatgtgtatgcggctataatagatgagaaagttgcaatgaagattgga
ccagggcattacgaaccaccaagcggatctcaaaactggtctgttgccgtcgaaggcaga
gactataaggtgtgggaaacatcttaa
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