Raphanus sativus (radish): 108828575
Help
Entry
108828575 CDS
T06014
Name
(RefSeq) U3 snoRNP-associated protein-like YAO isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108828575
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108828575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
108828575
NCBI-ProteinID:
XP_018457812
UniProt:
A0A6J0LCJ4
LinkDB
All DBs
Position
9:complement(22098826..22101215)
Genome browser
AA seq
494 aa
AA seq
DB search
MKYPKGGGFKRGGKKGSNDRDPFFEQETKKRRKVGYDDDEDIESIDSDAEENGFAEDKRE
ANEAEDEDEFADETAGEKRKRLAEALLKRTREARRRELEERDDEEDDDDDIVKTLMKKQL
EETGRVRRAIASSVQEPVSSDGFRVIVKHRHSVVSVALSDDDARGFSASKDGTILHWDVS
SGEREIYKWPSDETLKSHGMKVREPRNKKHSRVTLALAASSDGRYLATGGVDRHVHIWDV
RTREHVQAFPGHRNTVSCLCFRHGSTELYSGSFDRSVKAWNVEDRAFVQDSFGHQGEVLA
IDALRKDRAISVGRDRTMQLHKMSEQARVVYRAPASSLESCCYISDTEYLSGSDNGTVAL
WGMLKKKPVFLLKNAHSVVADGITTINAENGDDDLVEYNNSCTSSSWVSSVAVCRGSDLA
ASGAGNGFVHLMAVEASAIRPLFKLPLSGYVNSMAFAKSGKFLIAGVGQETRFGRWGCLK
SAQNGVAIHPLRLS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacccgaaaggtggaggctttaagagaggcggtaaaaagggttcgaatgacagg
gatccattcttcgagcaagagaccaagaaacgcaggaaagtcggttacgatgacgacgaa
gacatcgagtctatcgactccgacgccgaagagaacggctttgcggaagataagagagaa
gctaacgaagccgaggacgaagacgagttcgccgacgagacggcgggagagaaacggaag
aggctagctgaggcgttgctgaaacgaaccagagaagcaaggcggagagagcttgaagaa
cgtgacgacgaggaagatgatgatgatgatattgtcaagacgttgatgaagaagcagctc
gaggagactggtagggttcgaagagcaatcgcatcgagtgttcaggagccggttagtagc
gatgggtttcgtgtgattgtcaagcaccgacattctgttgtgtcggttgctctgtctgat
gacgacgctagaggcttctcagcttccaaagacggtactattctccattgggatgtatcc
tctggggagagggagatatacaaatggccgagtgatgagactctgaagtctcatgggatg
aaagtgagggagcctcggaataagaaacacagcagagtgactcttgctttagctgctagc
tccgacggtcgttacttggcgactggtggagttgatcgtcatgttcatatatgggacgtg
cggaccagagaacatgtccaggcctttccaggtcacaggaacacagtttcttgtctgtgt
ttcagacacggttccacggagctctattctggttcttttgatcgaagtgtcaaggcgtgg
aatgtagaagatagagcttttgtacaagacagttttggacaccagggtgaagtcctagcc
attgatgcgctaaggaaggatcgtgcgatttctgttggaagagacagaaccatgcaatta
cacaagatgtctgagcaagctcgtgtcgtctaccgtgcacctgcatcgtctcttgagagc
tgctgttacatcagtgatacggagtacctgtctggttcggataacggaactgttgcactc
tggggcatgttgaaaaagaaaccggtgtttctcctcaagaatgcacattccgttgtagct
gatggaatcactaccattaatgcagaaaatggtgatgatgatcttgtggagtataataac
tcatgcacatcaagttcttgggtaagttcggttgctgtatgtagaggtagtgatctagct
gcatctggagctggtaatggttttgtgcatttgatggctgttgaagcaagtgccattcga
cctttattcaagcttcctttgtctggatacgtgaactctatggcttttgcaaaatccgga
aagtttctgattgccggtgttggacaggaaacgagatttggaagatggggatgcttaaag
tctgcgcagaatggcgttgcaatacatcccttaaggctgtcataa
DBGET
integrated database retrieval system
