Raphanus sativus (radish): 108829257
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Entry
108829257 CDS
T06014
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108829257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108829257
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
RNases
108829257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
108829257
NCBI-ProteinID:
XP_018458422
UniProt:
A0A6J0LEA6
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MSSLKRKHDAVEDNLDCGESADGVDNKTNGFFDVYGPEAKPELVFNTPDITLNLQDVQGL
VTWVIGEGYMPSWVFIKNKPLIPKVVLLYLPGLDAALYLSQSKALARLKSCCGNPVPLLA
LRLVCAVDEMKTVDTILTCRGKKKKSATSPMEPPLSKPEACNLTGKTFIELTKDIPFPVA
YYTLSRKEMEQNGYKFETEFVSTLPAPSGSCPREILALDCEMCITKDGFELTRVTLVDIE
GQVLLDKLVKPTNLITDYNTRYSGITAEMMEGVTTTLRYIQEEFLKLVFKETVLVGHSLE
NDLVSLKISHNLVIDTAVLYKHPRGGSYKTKLRILAKKFLAREIQMSESGHDSVEDAKAA
MDLALMKIKYGPEFGSPPEMIRKRLLNVLNESEKATSIVDSINIVKRYASESSNAIPVCD
DDEALSKAMKEVKNRRSQFVWTQFSELNTHFQRRADDPEKLNSRLAKMISLQTCSSDASA
GPEKRPKSKVSAETKVILKKMDERVHALHAALPTNAMFIVCTGHGDTSIVHRVRKMLRDE
KSEIGFSREKVVKVLEELQAQAEVALCFVGIKQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttgaagcgtaagcacgacgccgtggaagacaatcttgattgtggagaaagc
gccgacggtgttgataataagaccaacggtttcttcgatgtatatggaccggaagcgaaa
ccagaactcgttttcaacactccggacataacattgaacttacaagatgttcagggactt
gtcacatgggttattggagaaggctatatgccctcgtgggtattcatcaagaataagcct
ctaattccaaaggttgtcttgctctacctccctggattggatgctgctctgtacttatca
cagtctaaagcacttgctaggttgaaatcttgttgtggcaatcctgtaccgcttttagct
ttgaggttggtttgtgcagttgatgagatgaagacagtagataccatccttacttgcagg
ggtaagaagaagaaaagtgctactagtccaatggaaccacctctatctaagccagaagca
tgtaatctgaccgggaagaccttcattgagctcacaaaagatataccgttccctgttgca
tactacactctaagtcgaaaggaaatggaacaaaatggatacaagtttgagacggagttt
gtttctacacttcctgcaccgtcaggatcatgtccccgtgaaattttggctcttgattgc
gagatgtgtattacaaaggatggttttgaattgacaagagtgacactggttgatatagaa
ggacaggttcttctagataaactagtcaagccaacaaatcttattactgattacaataca
aggtatagcggaataacagctgagatgatggagggggtaacaacaacccttagatatatt
caggaagagttcttgaagctggttttcaaagagacagtactagtaggacactctttggag
aatgacttggtttctctgaagatctctcataacctagtgattgacactgcagtgctctac
aagcatccacgtggtggttcttacaaaaccaaacttcggattctagccaaaaagtttctc
gctagagagatacaaatgtctgaatctggacatgacagcgtcgaggatgcaaaggcagcc
atggatttggcactaatgaagataaaatacggacctgagttcggttcaccacctgagatg
ataagaaagagactcctcaacgttttgaatgagagcgagaaagccacttctatcgtggac
agcatcaacatcgtgaagcggtatgcttctgagtcatcaaatgcaattccagtatgtgat
gatgatgaagcactttcaaaggccatgaaagaggtaaagaacaggcggtcgcagtttgtt
tggacacagttctcagaactgaacacacatttccagaggagagcggatgatccagagaaa
ctaaactcaagactagcaaagatgatctcattacagacatgtagtagcgatgcttcagcc
ggtcctgagaaacgtcccaaaagcaaagtctcagctgaaactaaggtgatcttgaagaaa
atggatgaaagagtccatgcccttcacgctgcattacctaccaatgcaatgtttatagtt
tgcactggacatggagacacgtccattgtacacagggtgaggaaaatgctaagagatgag
aagagtgagattgggtttagccgtgagaaagttgtgaaggttcttgaagagcttcaagca
caagctgaagtagctctctgttttgtaggtatcaagcaataa
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