Raphanus sativus (radish): 108829321
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Entry
108829321 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108829321
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108829321
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108829321
Amino acid related enzymes [BR:
rsz01007
]
Aminotransferase (transaminase)
Class II
108829321
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108829321
NCBI-ProteinID:
XP_018458487
UniProt:
A0A6J0LEH1
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Position
4:866171..869084
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AA seq
480 aa
AA seq
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MDTNLVEMFRAGLNWVTMALDAPSARVVLFGVRIQWHIFVEVLLGFVIVILLSQKSYKPP
KRPLTEQEIDELCDEWVPEPLIPPITEDMIHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHEKLLESCTSALKKYGVGSCGPRGFYGTIDVHLDCETRISTFLGTPDTILYSYGLS
TMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMDSLRSTLEKIMTKNK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYKFRVILDESNSFGVXGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPELLVKMKQNIALLWKGLKDIKGMSLASDPESPIVFLKLEKSSGSTKDDLILLE
KMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSDSDLIKXSESLKRLASELLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatctggtggaaatgtttagggcaggtttgaattgggtgacaatggctctg
gatgctccttcagctcgagttgtcttgttcggtgtccgaatccaatggcacatctttgtg
gaagttttgttgggttttgtcattgtcatcctcctctctcaaaagagttacaaacctccc
aagcgaccattaacagagcaggaaatagatgagctgtgtgatgaatgggttcctgaacct
cttataccaccaattacagaagacatgattcacgagccaccagttcttgaaagtgctgct
ggacctcatacaacggttaatggaaaagacgtggtgaattttgcgtcagctaattatctt
ggactcattggacacgagaagttactggaatcatgcacttctgcgttgaagaaatatggc
gtcggttcttgtggtcctcgtggattctatggtactattgatgttcatcttgattgcgag
accagaatatcgacgtttttgggaactcctgatacaatcctctactcttatggactttcc
acgatgttcagcacgattccttgtttctgtaaaaaaggcgatatcattgttgccgacgag
ggtgttcactggggaatacaaaatggacttcagctttccagaagtacaattgtctacttc
aagcacaatgacatggactctctccgtagcaccctcgagaagatcatgacaaagaacaag
cgctccaagaacttgaggcgttacattgtagccgaagctgtatatcagaactctggtcaa
atcgcaccgctcgatgagatagtaaaactgaaagagaagtataaatttcgtgttatattg
gatgaaagcaactcgtttggtgtgnctggccgttccgggagaggccttgcagagcatcac
ggtgtccctattgagaagatagatgttgtgactgctgcaatgggacatgcactagccaca
gaaggtggattctgcactgggaacgcccgcatcatcgattaccagagactcagcagttca
ggatatgtgttctctgcttctttgccgccgtacctcgcgagtgctgctatcacagccatc
gatgtcattgatcaaaaccctgagttgttagttaagatgaagcagaacattgctctgttg
tggaaaggattgaaagatatcaaggggatgtcgctagcaagcgaccctgagtcacctatt
gtcttcttaaagctagagaaatcgagtggttcgactaaagacgacttgattctacttgag
aagatggctgatcgtgctctgaaggaagactcgttgttggttgtgagctctaagaagtcg
tttcttgataagtgccggttgcctgtggggatcaaactcttggtctccgcgggacattca
gattctgatcttattaagntatccgagtctctgaagagactcgcttcagagcttctactc
taa
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