Raphanus sativus (radish): 108829814
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Entry
108829814 CDS
T06014
Name
(RefSeq) clustered mitochondria protein
KO
K03255
protein TIF31
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108829814
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108829814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
GSKIP_dom
TPR_1
TPR_2
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
108829814
NCBI-ProteinID:
XP_018458904
UniProt:
A0A6J0LGW7
LinkDB
All DBs
Position
4:45431658..45439864
Genome browser
AA seq
1371 aa
AA seq
DB search
MAGKSNKSKAKRAAQSSAPNSTASAPQSDAPAPDNGAANDAVEAAVPETNEVPPPAPVAA
ESESQEASNDEQPKQGELHLYPVSVKTQSGGKMELQLNPGDSVMDIRQFLLDAPETCYFT
CYELLLRTKDGETHHLEDYNEISEVADITTGGCSLEMIPAVYDDRSIRAHVHRARDLLSL
STLHSSLSTTLALKHDAAAAANKAQNPGDKPNVPELDSPGFMKDVPASLDKLINSSSEEI
KCVESIVFSSFNPPPSHRRLVGDLIYLDVVTLEGNKYCITGTTKAFYVNSSSGSILDPKP
SKSGFETATLIGLLQKLSSKFKKAFREVMEKKASAHPFENVQSLLPPHSWLRPFPVPDHQ
RDAARAEEALTISYGSELIGMQRDWNEELQSCREFPHSTPQERILRDRALYKVSSDFVDA
ALNGAIGVISRCIPPINPTDPECLHMYVHNNIFFSFAVDADIEQLSKKRLSNDLSVTEKV
SSSEKVPCQDKTCGGEHNAELNSCNEAPPIESEQATYASANNDLKGTKLYQEADVSGLYN
LAMAIIDYRGHRVVAQSVLPGILQGDKSDALLYGSVDNGKKICWNEDFHAKVLEAAKLLH
IKEHVVIDASENVFKLAAPVECKGIVGSDNRHYLLDLMRVTPRDANYTGPESRFCVLRPE
LITSFCQAEALEKSKCNTKTAEATDIVSDPSDVSVATSKTGDELIHGDENGASTTEKTVT
EKQNATADSAAAEISKLCNEISFNPNVFTDFKLGGTEEEISSDEENVKKVSSYLVDVVLP
KFIEDLCTLEVSPMDGQTLTEALHSHGVNVRYIGRIANGVKHLPHLWDLCLNEITVRSAK
HVLKNILRDIEDHDIGAAVSHFFNCFFGNVAAGKASTNNLHAKNQKKDQSITKKSQGRGK
GKASAKKTLSSYMMVDSNMLWSEIQEFAKAKYEFELTDLSRTTVKKVHVLRNLCQKVGIS
VAARKYDFDATSPFDATDVLDLRPVVKHSVPVCSEAKNLIEMGKLQLAEGMLSESYTFFS
EAFSILQQVTGPMHREVSNCCRYLAMVLYHAGDVAGAIMQQHKELIINERCLGLDHPDTA
HSYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDT
ALRYLQDALKKNERLLGPEHIQTAVCYHALAIACNSMGLFKLSQQHEKKTYDILVKQLGE
DDPRTKDSQTWIKTFEMREDQKTAQKQKGLAATAANTQKAIDLLKARPDLIQAFKDAAAA
ERSNAAVLGEAQPRGRGFDERAARAAAEVRKKAAAKGLLVRPHSGVQVPPQIAQLINPGT
AESSKKSGENGEAKVEEKKGTSENGKTANVAPAGLGAGLTSLDRKKQKAKK
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaagtcgaacaaatcaaaggccaagagagcggctcagagctctgctcccaac
tccactgcctcagctcctcaatccgatgctcctgctcccgataacggagccgccaatgat
gctgttgaagctgcggtgcctgaaaccaatgaagttcctcctccagctcctgtggctgct
gaaagcgagtcgcaagaagccagtaacgatgaacaacccaagcaaggtgaacttcatctt
tatcctgtttctgtgaaaacacagagtggcggtaaaatggagcttcaattgaaccctgga
gactcagtgatggatataaggcagttccttcttgatgccccagagacctgttacttcacc
tgctacgagctcttgctccggactaaggatggggagactcaccatcttgaagattacaat
gagatctctgaagttgctgacatcaccactggtggttgttccttagaaatgattcccgcg
gtgtacgatgataggtctatcagggctcacgttcaccgagctagagatctcctttcgctt
tccaccctccactcttccttgtcaacaacacttgccttgaagcatgatgctgctgctgca
gcgaacaaagctcagaatcccggagacaaaccaaacgtccctgagcttgattctcctggt
ttcatgaaagatgtacccgcttctctcgataagttgataaattcttcatcggaagagatc
aagtgtgtggagagcattgtcttctcatccttcaaccctcctccaagccacagaaggctt
gtaggagacctaatctatttggatgttgtgacgctggaaggtaacaagtactgcatcacc
ggtaccacaaaggcgttttacgttaattctagctcagggagtattctcgatccaaaaccg
agtaaatctgggttcgaaactgccactctcataggattattgcaaaaacttagctctaag
tttaaaaaagctttccgtgaggtcatggaaaagaaagcatctgcacatccctttgaaaat
gtccagtcacttttgccaccacactcatggctaagaccatttcctgttcccgatcaccag
cgcgatgcagcgagagcagaagaagcactgaccatttcctatggtagtgagctgatcggt
atgcaaagagattggaacgaagagttgcaatcttgcagggagttccctcacagtactcct
caggagaggatcttacgtgacagggctctttacaaagtgtcttctgacttcgtcgatgcg
gcgcttaatggagcaattggtgtaatcagccgatgtataccacccataaatccaactgat
ccagagtgtctgcacatgtatgtgcacaacaatatctttttcagttttgctgttgatgcc
gacatagaacagctatccaagaagcgtctatcaaatgatctttcagtgactgagaaagtg
tcctcgtctgaaaaggttccatgccaagacaaaacatgcggtggagaacacaatgcagag
cttaacagctgtaatgaggcgcctcctattgaaagtgagcaggcaacgtatgcctctgca
aacaacgacttgaaaggcacaaagttatatcaagaagcagatgtctcggggttgtataat
ctggcaatggccattattgattacagaggtcatagggttgttgctcagagtgttctccca
ggcatccttcaaggagataaatcagatgcgcttttgtatggttcagtggataatggcaag
aaaatctgctggaatgaagattttcatgctaaggtgttagaggctgcaaagcttcttcac
ataaaggaacatgttgttattgatgcttctgagaacgtcttcaagttagctgcaccagta
gagtgcaaggggattgttggaagtgataacagacactatctattggacttgatgagagtg
acacctcgtgatgccaattacacgggtccagagtcacgcttttgtgtcctaagaccagaa
ctgatcacatcattttgccaggccgaagctctggagaaatcaaaatgtaacaccaagact
gctgaagcgacggatattgtttctgatccttctgatgttagtgttgctacttctaaaact
ggtgatgaattgatccatggagatgaaaacggagcttcaactactgagaaaactgttaca
gaaaagcaaaatgccaccgccgattctgcagccgctgaaatttccaaactatgtaatgaa
atatcatttaaccctaatgttttcactgacttcaaattaggtggcacagaagaggagatt
tcttcggatgaagaaaatgtgaagaaagttagctcgtaccttgtggatgtggtacttcca
aaattcatagaagatctttgcactctcgaagtttccccaatggatggtcagactttgact
gaagcgctccattctcatggtgttaacgttcgttacataggaagaattgctaacggagtg
aagcatttgcctcatctatgggatctttgcctgaatgaaattaccgtcagatccgccaag
cacgttctcaagaacattctaagagatatagaggatcacgatattggcgcagcagtctca
catttcttcaattgtttcttcggaaatgttgctgcgggaaaagctagcaccaacaacttg
catgctaaaaatcaaaagaaggaccaatcgatcaccaagaagagtcaaggaagggggaaa
ggcaaagcttctgcaaagaagactctttcatcgtatatgatggttgattccaacatgcta
tggtctgagattcaggaatttgcgaaagccaagtatgagtttgagttgaccgacctgtca
agaactacagttaaaaaagtacatgttctccgcaacctttgccaaaaggttggcatcagt
gttgctgctcgcaaatatgactttgatgccacctcgccttttgatgcgacagatgtattg
gatcttcggcctgttgttaagcactctgtccctgtatgctctgaggctaaaaatctcatc
gagatggggaaactgcaactggctgagggcatgcttagtgaatcctacacgttcttttca
gaggcgttttcaatacttcagcaggttactggtccaatgcaccgggaagtttcaaactgc
tgcaggtacctagccatggttttgtaccacgcaggggatgtggctggggccataatgcag
caacacaaggaattaatcataaatgagcgatgccttggtttggaccatcctgatactgct
cacagctatggcaatatggctcttttctaccatgggctgaaccagacagaacttgctcta
cagaacatgggccgtgccttgctgttacttggcctttcatctggccctgatcatcccgat
gttgcagccacatttataaatgttgccatgatgtatcaagacatgggaaaaatggacaca
gctctgcgttatcttcaagacgctttgaagaaaaatgagagacttctcggccctgaacat
attcagactgcagtatgctaccacgctcttgctattgcgtgcaacagtatgggtttattc
aagctctctcagcagcatgagaagaaaacctatgatatacttgtcaaacaactgggagag
gatgatcccaggacaaaagactctcaaacctggataaagactttcgagatgcgtgaggat
cagaaaactgcacagaagcagaaaggactggcagccactgcggccaacacacaaaaggct
atcgatctcttgaaggcacgtcctgacctgatacaggcgttcaaagacgcagcagcggca
gagaggtctaacgcggctgttctcggagaggctcaaccacggggcagaggttttgatgaa
agagctgctcgtgctgcagctgaagttaggaagaaagcagctgctaaggggctacttgtt
cgtccccatagtggtgttcaagtgccaccacagatcgctcaactcatcaatccaggaacc
gccgaatcttctaagaagagtggggaaaatggagaggcaaaggtagaagagaagaaagga
acctctgaaaacgggaagacagcgaacgtggctcctgcagggttaggtgctggattaaca
tctttggataggaagaagcaaaaggccaaaaagtaa
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