Raphanus sativus (radish): 108829897
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Entry
108829897 CDS
T06014
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00270
Cysteine and methionine metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108829897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108829897
03032 DNA replication proteins [BR:
rsz03032
]
108829897
03036 Chromosome and associated proteins [BR:
rsz03036
]
108829897
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rsz02048
]
108829897
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108829897
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108829897
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108829897
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108829897
Prokaryotic defense system [BR:
rsz02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
108829897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
108829897
NCBI-ProteinID:
XP_018458991
UniProt:
A0A6J0LHP8
LinkDB
All DBs
Position
1:complement(13825405..13830966)
Genome browser
AA seq
1512 aa
AA seq
DB search
MVRNETRAGKQKKRPLPESKESDYDDDLSMRQTRPKRAAACTNFKEKSVRISERSATVAA
KQHQTVEDEIVALHLTDSSPQSCGEDEPHQTRRLTDFVLHDTDGVSQAVEMVEHGDMFIT
GLILPSGECFDKEKAKGVRCEGFGRVDNWSISGYEDGSPVVWVTTSLADYKCVKPATSYK
KVYDYFFQKAYASVEVYKKVAKSNLMSLDELLVAVARTMSLETKCFSSDYLAIKNFVISQ
GEFIYNQLAGLDDTVKQDDARFVEIPVLAALRDASSRILEYDAGKPSNGVLRIDGVSERK
AMTSDQQLVDTDEQFARLVQDEEYMKFMQRPRKNSISAASSGKGYIMTTEDEIASDYPLP
AHYKNSQVETDELLLYEDDYYEVDIDELPRKMLHNWALYDIDSRLISLELLPVKPCDDID
VTIFGSGLMADDQGIWIDLDDQTTSMPSEKHEGIPIFLSQIKEWMIEYGVSTISVSIRTD
AAWYRLGKPSKQYSPWFEPILKTARVVISIFGLLEKETRMARLSFEDVIRRVSEFENNHK
AYISSDRSAVDRYVVGHGQIMLQMFSEFPNKEIGKCSFITGLANKRAEKHNTRWTIKKKK
ILLKVNLNPRAGMAPISKRKAMQATTTCLINRIWGEFYSIYSPEEPLQAVCAEEEDEEEE
NEEDDTEETEPEPVEVEGSNTLPKKILGSCGKMETIWDGESLGKTSAGEPLYRQALLEGE
IVAVGGAVTVEVDEVQSIYFVEYMFESSDHCKMLHGRRLQRGSETVLENAANERELFLTN
ECMTLHFKDIKGTVCFEIRKRPWGHQFRKENTTADKLDRARAEERNAKDMPKEYFCKSLY
SPGRGGFFSLPLSDMGCASGSCTSCRIRDDEEERKKIKLNASKTGFSSYGVDYCADDFVY
VYPDCINGSKKANGKFKSGRNIGLRAFVVCQLLEIIFPKKSRKGCSFEVNVRRFYRPEDI
SEGKAYASDIRELYYSEDTYVLQPEALKGKCEVRKKNDMPSCREYPILDNIFFCEQIYDP
SKGSVKQLPVNTKPKFSAIKDNTLLRKEKGKGVESETGSAIVKPDEVPKEMRLSSLDIFA
GCGGLSQGLEKAGASTTKWAIEYDEPAGEAFRKNHPETTVIVDNCNVILRAIMEKCGDQD
ECISTTEANELAAKLDEDQKRTLPLPGQVDFINGGPPCQGFSGMNRFSQSPWSKVQCQMI
LAFLSFADYFRPKYFLLENVRNFVSYSKGQMFKLTLASLLEMGYQVRFGVLEAGAYGVSQ
SRKRAFIWAAAPEEVLPEWPEPMHVFNVSELTISLSKGLRYAAVRSTQQGAPFRPITVRD
TIGDLPPVENGESKINKEYQNDSISWFQKEIRGNKNVLIDHISQKMNEHNLIRCKRIPKR
PGADWRDLPEEKVTLSTGMVVDLIPNLLKTAHLHNQWKGLFGRLDWEGNFPTCTTEPGPM
RKVGMCFHPDQDRILTVREYARCQGFPDSYEFEGDIAHKHRQIGNAVPPPLAFALGRKLK
EAVQINKCAKSN
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaatgaaaccagggctgggaagcagaagaagagacctcttccagagagcaaa
gagtcagattacgacgatgatctctccatgaggcagacaaggccaaagcgagctgcagca
tgcacaaactttaaggagaaatccgtccgtatctccgagagatccgccaccgttgcagca
aagcagcaccagactgtggaggacgagattgtagctctacacttgacagattcttctccg
cagagctgcggcgaagacgagcctcaccaaaccaggaggcttaccgatttcgttttacat
gatactgacggagtttcgcaggctgtggagatggtggaacacggtgacatgttcatcacg
ggcctgatcttgccttccggtgaatgttttgataaggagaaagcgaagggcgtgaggtgt
gaaggttttggacgtgttgataattggagcatctctgggtatgaagatggttccccagtg
gtgtgggtgacgacctctctggcggattacaaatgtgttaagcctgctactagctacaag
aaggtgtatgattatttcttccagaaggcatatgcctcagtggaggtttacaagaaagtg
gccaagtctaacttgatgagtcttgatgagttgcttgtggcagttgcgaggactatgagc
ctggagactaagtgcttttctagtgattacttggccatcaaaaattttgttatatcccaa
ggagaattcatatataaccagcttgcgggtttggatgatacggtcaagcaagacgatgca
agatttgttgagattcctgtactcgctgctctcagagatgcgagtagtcgcatacttgaa
tatgatgctgggaaaccttctaatggggtcctgaggattgatggagtttctgagaggaag
gccatgacatctgatcaacaactggttgacacggatgaacaatttgctcgacttgtacaa
gatgaagagtatatgaaatttatgcaacggcccagaaaaaacagcatctcagctgcttct
tcaggtaagggttacataatgaccactgaagatgagatcgccagtgattatcctctccca
gctcattataagaattcccaagttgaaactgatgagcttttattatacgaggatgattac
tacgaggttgacatcgatgagcttcctcgcaagatgcttcacaattgggcactttacgac
attgattcaaggttgatatccctggagcttctcccggtgaagccttgtgatgatatcgat
gtaaccatctttggatctggtttaatggcagatgatcaagggatctggattgatctagat
gatcaaactacctctatgccgtcagagaaacatgaaggaatacccatattcctcagtcaa
ataaaggaatggatgattgagtatggggtgtcaacgatctcggtttcaatacgaacagat
gcagcctggtatcgacttggtaaaccgtcaaagcaatactccccttggtttgaacctatt
ctgaaaaccgcaagggttgtcataagcatttttggtctcctggagaaggaaactagaatg
gctaggctttcatttgaagatgtcataagaagagtgtctgagtttgagaataaccataag
gcttacatttcttctgatcgctcggcagttgacagatatgtggttggccatgggcaaata
atgttgcagatgttttcagagtttcctaacaaggagatcggaaagtgttcatttattact
ggtcttgcaaataaaagggcagaaaagcacaacacaagatggaccatcaaaaagaagaaa
attttactgaaagtgaatttgaatccaagggcaggtatggcacctatatccaagaggaag
gctatgcaagcaacaacaacttgcctgatcaacagaatctggggcgagttttactccatt
tactctccagaggagccattgcaggcagtttgtgcagaagaggaggacgaagaggaggaa
aatgaagaagatgacacagaggaaactgaacctgaacctgttgaggttgaagggtctaat
actcttccaaagaaaattctaggcagttgtggaaaaatggaaacaatatgggatggtgag
agtctaggtaaaacttctgctggtgagcctctctatcgacaagccctccttgaaggggaa
atagtggctgtaggtggtgctgtcaccgtggaagtcgacgaagttcaatccatctacttt
gtggagtacatgtttgaaagttcagatcactgcaaaatgctacatggaagacgtttacaa
agagggtctgagactgttctagagaatgctgctaacgagagggaactattcttgacaaac
gaatgcatgactctgcattttaaggacataaaagggacagtttgtttcgagattcgaaaa
agaccatgggggcatcagtttaggaaagagaataccactgcagataagctggaccgggca
agagcagaagaacgaaatgcaaaagacatgcctaaggaatacttctgcaagagtttgtat
tcacctgggagaggaggtttctttagtcttccactcagtgatatgggctgtgcttctgga
tcgtgcacttcatgcagaataagagatgatgaagaggagaggaaaaagatcaaactcaac
gcttcaaagactggtttttcttcctatggggttgactattgcgctgatgattttgtctac
gtataccccgactgtatcaatggatcgaagaaggctaatgggaaatttaagtcagggcgg
aacatagggttaagagcctttgttgtatgccaacttcttgagatcattttcccaaagaaa
tctagaaagggttgttcctttgaggttaatgtccgaaggttttataggcctgaagatata
tctgaaggaaaggcctatgcatcagacatccgagagttgtattacagcgaggacacatat
gttctccaaccagaggctctaaagggaaaatgtgaagtaagaaagaaaaatgatatgccc
tcatgccgtgagtatccaatattggataatattttcttctgtgaacaaatatatgaccca
tcaaaaggttcggtcaagcagttgcccgtcaataccaagccgaagttctctgctattaag
gacaacacacttttaagaaaggaaaaggggaagggagtagagagtgaaactggttctgct
attgtcaagcctgatgaggtacctaaagagatgcgtctgtcgagcctagatatttttgct
ggttgtggtggcctgtctcagggactggaaaaagcaggtgcatctacaacaaagtgggca
atcgaatatgatgagccagctggggaggcttttagaaaaaaccatcccgaaacaacagtt
attgttgataactgcaatgtgattcttagggctataatggagaaatgtggagatcaagat
gagtgtatctctactacagaagctaatgaactagctgctaaacttgatgaggaccagaag
cgtactctaccactgcctggtcaagtagatttcatcaacggaggccctccatgtcagggg
ttctctggtatgaaccggtttagccaaagcccatggagtaaagttcagtgtcaaatgata
ttagcattcttgtcttttgctgattatttccggccaaaatactttctcctggagaacgtt
aggaactttgtctcatatagtaaagggcagatgtttaaactcactctggcttctcttctc
gaaatgggttaccaggtgagatttggggtcttggaggcaggtgcatatggggtttctcaa
tctcgcaaaagagcttttatatgggcagctgcaccggaagaagtccttcccgaatggcct
gagccaatgcatgtctttaatgtttcagagttgacaatctcactatccaaaggtttacgc
tatgctgctgttcgtagtacccaacagggagcacctttccgtccaataaccgtcagagac
acaatcggcgatcttccaccagtagaaaatggggaatccaagataaacaaagagtatcaa
aatgattcaatctcgtggttccaaaaggagataagaggaaacaagaatgttctcattgat
cacatcagccaaaagatgaacgaacacaaccttataagatgtaaaagaatcccaaagagg
ccaggtgctgattggcgtgacctcccagaggaaaaggtgacgttatctactggaatggtg
gtggatttgattccaaatctactaaaaacggctcatctacacaaccagtggaaaggactg
tttgggcggttagattgggaaggcaactttccaacttgcactactgaacctgggccaatg
agaaaggttggtatgtgcttccaccctgaccaagacaggatactcactgtccgtgaatac
gcccgatgtcaggggtttccggatagctatgagttcgaaggggacatagcacacaagcat
aggcagattgggaatgcagtgcctccacctttggcatttgctcttggtcgcaaactcaaa
gaagcagtacagatcaataagtgtgccaaaagtaattag
DBGET
integrated database retrieval system
