Raphanus sativus (radish): 108830048
Help
Entry
108830048 CDS
T06014
Name
(RefSeq) chalcone--flavanone isomerase-like
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00941
Flavonoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
108830048
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
108830048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chalcone
Chalcone_2
Motif
Other DBs
NCBI-GeneID:
108830048
NCBI-ProteinID:
XP_018459161
UniProt:
A0A6J0LI65
LinkDB
All DBs
Position
7:18014457..18016267
Genome browser
AA seq
252 aa
AA seq
DB search
MSSSHCPSPLPSVTKLQVDCVTFPPSVISPASSTPLFLGGAGVRGLDIHGKFVIFTVIGV
YLAPVAVPSLSVKWKGKTTEELTESVPFFREIVTGSFEKFIKVTMKLPLTGHQYSEKVTE
NCVAIWKSLGIYTDAEAKAVERFLEVFKDQTFPPGASILFALSPNGSLTIAFSKDDHIPK
TGKAVIENKLLAEAVLESIIGKKGVSPGTRLSLAERLSQLMKENKVEEDATKTDNQDEAN
DLSLGDKLAKEN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcccattgtccgtcaccgttaccctccgtcaccaaacttcaagtagactgc
gttacttttccaccctcggtcatctcaccggcttcctccactcccctcttcctcggtggc
gcaggcgtgcgaggtttggacatacacggaaaattcgtgatcttcaccgtcatcggagtt
tatctagctcctgtcgccgtcccgtcactttccgttaagtggaaaggcaaaacgacagag
gagttaacggaatccgtccccttcttccgtgaaattgtcacaggttcgtttgaaaagttt
attaaggtgacgatgaaactgccgttaacgggacatcaatattcggagaaagtaacggag
aactgtgtggcgatttggaaatcgctaggtatctacacagacgctgaagctaaagctgtg
gagaggttcttggaagtcttcaaggaccaaacgttccctcctggtgcttcgatcctcttt
gctctctcccctaacgggtctctcacgattgccttttccaaagacgatcatattcctaaa
accggaaaagccgtgatcgagaataaattgctggcagaggcagttcttgaatcgatcata
ggaaagaagggtgtgtctcctgggactagattgagtcttgccgagagattatctcagctg
atgaaggagaacaaggtcgaagaagatgcaacaaagactgataatcaagatgaagctaac
gatctctcccttggagataagttggccaaagagaactaa
DBGET
integrated database retrieval system
