Raphanus sativus (radish): 108830259
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Entry
108830259 CDS
T06014
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108830259
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Motif
Pfam:
GH3
GH3_C
GH3_M
Pox_vIL-18BP
Motif
Other DBs
NCBI-GeneID:
108830259
NCBI-ProteinID:
XP_018459364
UniProt:
A0A6J0LI90
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Position
5:15572358..15575880
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AA seq
608 aa
AA seq
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MIPSYDPNDTEAGLKLLEDLTSNAEAIQEQVLHEILSQNSGTQYLRAFLDGESDNNQQSF
KNKVPVVNYDDIKPFIQRISDGESSDIVSAQPITELLTSSGTSAGKPKLMPSTAKELDRK
TFFYSMLVPVMNKYVNGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRKRPFN
KYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRAHVLRVGAVFASAFLRAVKFLEDHYKEL
CADIRTGTITSWITDSACRDSVLSILEGPNQELADEIESDCAEKSWEGILRRLWPKAKYV
EVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPSNVSYTLLPNMAYF
EFLPVDDKSHEEIHFASHFNTEDDDGIKEDLIVDLVNVEVGRYYEIVITTFTGLYRYRVG
DILKVTGFYNKAPQFRFVERRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQQPTSLLLTEY
TSYADTSSIPGHYVLFWELKPRYNNDLPKLHDKTMEKCCSEVEDRLDYVYRRCRNKDKSI
GPLEIRVVSLGTFDLLMDFCVSQGSSVNQYKTPRCVKSGGALEILDSRVTGRFFSQRVPQ
WEPLGLDS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatacccagttacgacccaaatgatacagaggctggtctcaagcttctcgaggatcta
acctcaaatgcagaagcaattcaagaacaagttctccacgaaatactctctcaaaactcc
ggaactcaatatctccgagcatttcttgatggagaatccgacaacaatcaacaaagtttc
aagaacaaagtccctgtggtaaattacgacgatataaagcctttcattcaacgaatctcc
gatggagaatcctctgatatcgtctccgctcaacccatcacagagctcctcactagctcg
gggacttctgcaggaaagccgaagttgatgccttctacagctaaagaattggacaggaaa
acatttttctacagcatgcttgtgcctgtcatgaacaaatatgtgaatgggctagatgaa
ggaaaagggatgtatcttcttttcataaaacctgagatcaagactccttcaggtctaatg
gcacgtcctgtgttgactagttactacaaaagtcagcatttcagaaagagaccatttaac
aagtacaacgtctacacaagccctgaccagacaattctctgtcaagacagcaaacagagc
atgtactgtcagcttctctgtggtttagtccaaagagctcatgtcctaagagttggagct
gtttttgcctctgcctttcttcgtgcggtcaaatttttggaagatcattataaggagctt
tgcgcagacattagaaccggtactatcaccagctggatcactgactcagcctgcagagac
tcggttttatcgattcttgaagggccaaatcaagaactggctgatgaaattgagtctgac
tgtgctgagaagtcgtgggaaggaattttaaggaggctatggcctaaggctaagtatgtt
gaggtgattgtgacaggttcgatggctcaatacattcccacactcgagttttatagcggt
ggtttaccgttggtttcaaccatgtatgcttcctctgagtgttactttggtattaacctt
aatccgctgtgtgatccttcgaatgtttcgtatacgcttcttcctaacatggcctacttc
gagttcttgcctgttgatgacaaatcccatgaagagattcactttgcttctcattttaac
accgaagatgatgacggtatcaaggaagatcttattgtcgaccttgttaatgtggaagtt
ggtcgatactacgaaattgtcattactacattcacaggtttatacagatacagagtgggt
gatatcctaaaagtgactggtttctacaacaaagcacctcaatttcgtttcgtggaacga
agaaacgttgtattaagcatagataccgacaaaacgagcgaggaagatctactaaacgcg
gtgacacaagctaaactcaaccatctccaacaacctacaagcctcctactcacggagtac
actagctatgcagacacgtcatcgatcccggggcattacgtgctcttctgggagctaaag
ccacgttacaacaacgacctaccgaagctacacgacaagacaatggagaaatgttgttct
gaggttgaggatcgtttggattacgtgtacaggagatgcaggaacaaagataaatctatt
gggccattggagataagagttgtgagtttggggacttttgatttactgatggatttttgt
gtctcacaaggatcttcggtgaatcagtacaagactccaagatgtgttaaatctggagga
gctcttgagattcttgattccagggttactgggagattcttcagtcagagagttcctcaa
tgggaaccacttggtttagattcttag
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