Raphanus sativus (radish): 108830348
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Entry
108830348 CDS
T06014
Name
(RefSeq) two-component response regulator ARR10 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108830348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108830348
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108830348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
RVT_3
zf-RVT
Myb_DNA-binding
RNase_H
KaiA_N
Motif
Other DBs
NCBI-GeneID:
108830348
NCBI-ProteinID:
XP_056851797
UniProt:
A0A9W3CJM3
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MTMEQDIEAMDQFPLGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDKAQTALELLRENK
NKFDLVISDVDMPDMDGFKLVELVGLEMDLPVIMLSAHSDPKNVMKGVKHGACDYLVKPV
RIEELKNIWQHVVRKSKFKKMIKSIVTTNCVSEGNSDQNGVRANRKRKDQLEEEDEEQEE
QERGNEKKPRVIWTRELHNKFLAAVDHVGVKNAVPKKILELMNVDNLTRENVGSHLQKFR
LALKKINNEANQQANLDSQFTQMSSLKGLGSFHHYRPIPLGSSQFHGGAATMRHYPSNRT
LAGMFSSSLPRNHNDGGYMLQGMPLPPLETLHIANNNNNNKAFPSFTSQQSSPLVSPNNH
FVPEGHQGFSPHLEINKRLEDWSNAVLSNNIPQSNLHSKPDALEWNLFGNSTSPNLDTTN
QTSFCRDTDFGSPNAAQADSFDPLQMKQQHENILSPMTVAQLLRSSSGNEGLFMGQQKLE
NGFMASDTGSLDDIVNSMMTQYESSIRLLQPSSFNMEDTLVWLSEKSGCYSTKSGYALTK
LAGENRAHHQNTAQFSWKASIWNIDTSPKLKLFLWKLANRALPVGEALARRGIAATTTCK
RCGAIESEIHTFFQCPFAEKVWDLIPALHKPISSTSNILNLIDISKKMITLPPAGITKPL
FPWLLWNLWTCRNQLLFEDKKFSEVEVLNKSIRDAREWSNAQAIPVSNPPAPPPPSALNY
SSTATACFTDGAWDNVTKTGGMGWCFHDHLGSVTLQGADAKRYVGSALMAETLALKMALT
TAVRNDILDLRCFSDSRSLVSLLTTNTSVVELQGILHDIRVLSSSLNSISFHYISRLENG
FADGLAKSALALCMNSPPSME
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggaacaagatattgaagctatggaccagtttccactagggatgagagttctt
gccgttgacgatgaccaaacttgtctccgtattctcgagactttacttcaccgctgccaa
taccacgttacaacaacggataaggcacagaccgcactggagttgttgagggagaacaag
aacaagtttgatctcgtgattagcgatgttgacatgccagacatggatggtttcaagctg
gttgagcttgttggtcttgaaatggacttacctgtcataatgttatctgcgcatagcgat
ccaaagaatgtgatgaaaggagtcaagcacggtgcctgcgactatctcgttaaaccggtt
cgaatcgaggagctcaagaacatatggcaacacgtggtgaggaaaagcaagttcaagaag
atgataaagagcattgtgactactaattgtgtatctgagggaaactctgatcaaaacggg
gtgagggcaaacagaaaacgtaaagatcagcttgaagaggaagatgaagaacaagaagaa
caagaaagagggaatgaaaagaagcctcgtgttatttggacgcgagagctgcacaataag
ttcctagcagccgttgatcatgtgggcgttaagaacgctgtaccaaagaagattcttgag
ctgatgaatgttgacaacctcacaagagagaatgttggaagccaccttcagaaattccgg
ttagccttgaagaaaataaacaatgaagccaatcaacaagctaacctggactcacaattt
acacaaatgagttcactcaaaggacttggcagcttccaccactaccgtcccatacctctt
ggatccagtcagttccatggtggagccgcaaccatgaggcattacccatcaaataggacc
ttggcaggaatgttctcatcatcgcttcctcgtaaccacaatgatggaggttacatgctt
cagggaatgccacttcctccactagaaactcttcatatagccaataacaacaacaacaac
aaggcttttccgagctttacttcacaacaaagctctccgctagtttctcccaataatcac
tttgttcctgagggtcaccaggggttttctcctcacttggagatcaacaaacgtcttgaa
gactggtcaaacgctgtgttgtcaaacaacattccacagagtaatcttcattcaaaacca
gatgccttggaatggaacttgttcggcaactcaaccagcccaaacctggatacaacaaat
cagacgtcattctgcagagacacagattttggatccccaaatgctgcccaagcagactct
tttgatccattacagatgaagcagcagcatgaaaacatcttaagtcctatgacagttgct
caactgttgagaagtagcagtggtaatgaagggttattcatgggacaacagaagctagag
aacggcttcatggcttcagataccggttccttggatgatatagtcaattccatgatgact
cagtatgaaagctctattagacttctccaaccgagctccttcaatatggaagatacactg
gtctggttgtcggagaagtcgggttgttattccacaaagtctggctatgcgctgactaaa
ctcgccggagaaaacagagctcatcatcagaatacggctcagttcagctggaaggctagt
atatggaatatcgatacctcccccaaattgaaactcttcttgtggaaattggcgaatcgt
gccttacctgttggggaagctttggccagaagagggattgcagctacaacaacttgtaaa
cgttgcggtgccattgagagtgagatccatacctttttccaatgcccttttgctgaaaaa
gtttgggatcttatcccggcgctgcacaaaccgattagctcaacctccaatattctgaac
ctcatcgacatcagcaagaagatgatcactctaccacctgcaggtatcactaaacctctg
ttcccctggctgttatggaacctatggacatgcaggaatcaactcctgtttgaagacaaa
aagttctctgaggttgaggtcctaaacaagtcaatcagagacgcaagggagtggagtaat
gcccaagccatacctgtatcaaatcctccagctcccccgcctcctagcgctctcaattac
tcttccactgctactgcttgttttacagatggagcgtgggataatgtcactaaaactggc
gggatgggatggtgtttccatgatcacttgggttcagtaactctacaaggtgctgatgca
aagagatatgtcggctctgctttgatggcagagactctagctcttaaaatggcactgaca
accgcagttcgcaatgatatcctcgacctgaggtgtttttcagactctcgcagtcttgtt
tctctgctcacgacaaatacatccgttgttgagctccaagggatcctccacgacatccgc
gtgttgagtagttcccttaactctatctcttttcattacatttctcgtttagagaatgga
tttgcggacgggctagctaagtctgctctcgccctttgtatgaactcacctccctcgatg
gagtaa
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