Raphanus sativus (radish): 108830369
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Entry
108830369 CDS
T06014
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108830369
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_27
Motif
Other DBs
NCBI-GeneID:
108830369
NCBI-ProteinID:
XP_018459480
UniProt:
A0A6J0LGX1
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Position
2:complement(3071451..3074771)
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AA seq
645 aa
AA seq
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MSVSSHKIIAFTFLLYIHRVQAQYFILNFSDEDFHNGFDNNSTNEDSNYEKFGQTEPRSD
QDLDPGSWRPILEQLDDSVVHPALTPYYSALKKMVSAASEGNFMLMEEAVNEVNASASAG
DPPARSVMGFVYGMGMTREANGTKSFQQHQLAAEGGNMQSKMALAFRYVQLDMHDKAAKL
YAEVAGTALSSFLISKDFSMVVPLRIHRGAEEDKDVLRRFRGEDGEDFKILEYQAQIGHP
SAMYRTGLFYYFSLRGIRHDHAKAMYWFSEAAEKRELRSMEILGEIYALGTGVEKNYTKA
FRCLTLAAEGGLYSAYTGLGYLYLKGYGVDKNYTKARECFEKVSDREDPSGMYYLGMLYL
KGIGVKRDVKQATKYFLVASNAGLPKGMYQIAKMLHAGAELKKNPNMLKLAVALYKSVSE
RGPWSSLSRWALEAYMKGDVGKAFILYSRMSELGYEVAQSNAAWILDKYGKRSMCMGVSG
FCTDKERKERAHALWWRASKQGNDYAALLVGDAYYYGRGKERDFVRAAEAYMYAKSQLNA
QAMFNLGYMHEYGQGLPFDLNLAKSYYNQALENEPVSKFPIMLALVRLWVRRKYVDVSIM
VTLLLASLITVLHLFNKRSQRREVTVDSIGADVAQPLVESAAFPN
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctcaagtcacaagatcatagcattcactttcttgctttacattcatcgcgtc
caggcgcaatacttcatcctcaacttctctgatgaagatttccacaatggtttcgacaat
aacagcacaaacgaagactctaactacgagaaattcggacaaacggaacctagatccgac
caggatcttgatcctggttcctggcgaccaatattggagcagctggacgactcagtcgtc
caccctgcgttgactccgtactactctgccctcaagaagatggtctcggccgctagcgaa
ggaaactttatgttgatggaagaagcggttaacgaggtgaacgcttctgcatcggcagga
gatcctccagcacggtcggtgatggggttcgtgtatgggatggggatgacacgggaggct
aatggaacaaagtcgtttcagcaacatcagttagcagctgagggagggaatatgcagtcc
aagatggcccttgcattcagatacgtacaactagatatgcatgataaagctgccaagtta
tatgctgaggtagcggggacagcactcagtagctttttgatctctaaggatttctccatg
gttgtaccacttagaattcatagaggagcagaggaagacaaagatgtgctaaggagattc
cgtggtgaagacggtgaagatttcaagatattggagtaccaggcacagattgggcatcct
tcagcaatgtacagaactggattgttttattatttttctctgagaggaataagacatgat
cacgccaaggcaatgtactggttctcagaggcagcagaaaagagagagttgaggtcaatg
gagattcttggtgagatatatgccctaggaaccggtgttgagaaaaactacaccaaggcg
tttagatgtctcacactggctgcagaaggaggtctgtattcagcatatactggcctaggg
tacttgtatctcaaaggatatggagtagataagaactacactaaggccagagaatgtttt
gagaaggtttctgatagggaagacccaagtgggatgtactaccttggaatgttgtatctt
aaaggcatcggagtcaaaagagatgtgaagcaggcaaccaaatacttccttgttgcttca
aatgctggcctaccaaagggtatgtatcaaatcgccaagatgttacatgctggcgccgag
ctcaagaagaatcctaacatgctgaaactggctgttgctctttacaagtcagtatcggaa
agagggccatggagttctctctctagatgggctcttgaagcttacatgaagggtgatgtg
ggaaaggcttttatattgtactcaagaatgtcagagcttggttacgaagttgcacaaagt
aatgctgcctggatcctcgataaatacggtaaaaggagcatgtgcatgggagtttctgga
ttttgcacggataaagagaggaaggaacgtgctcatgctttgtggtggcgagcctccaaa
caaggaaacgactatgctgctttgcttgtgggagatgcatattactatggccggggtaag
gagagggattttgtgcgtgcagcagaggcatacatgtatgcaaaatctcaactaaatgca
caagccatgttcaaccttggttacatgcatgaatatggtcaagggcttccttttgatctc
aatcttgctaaaagttactacaaccaagctctcgagaacgagccagtatccaaatttcca
atcatgcttgctcttgtgaggttgtgggttcgcaggaaatatgttgatgtttccatcatg
gtgactcttcttttagcctctcttataaccgtcctacatctctttaacaagagatcacag
cgcagagaggttaccgtggattccatcggtgctgacgttgcacagcctctggttgagtct
gctgctttccccaactga
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