Raphanus sativus (radish): 108830405
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Entry
108830405 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108830405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108830405
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108830405
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108830405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Drc1-Sld2
zf-C3HC4_2
DUF2457
ZnF_RZ-type
MscS_TM
RPA43_OB
DARPP-32
SspB
Piezo_TM1-24
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108830405
NCBI-ProteinID:
XP_018459504
UniProt:
A0A6J0LIM8
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MVKKTNAEKAVAGEASSSSSSRRKRQRLPSVAEDEGRGVTASVDEDEVITPEARSGTLLD
LDLLDCPVCLEALTKHVFQCDNGHIACSSCCLKLRNKCPACALPIGNNRCRIVERIVELV
TVPCPNSKHGCTEKFSYGKESAHEEECGFALCYCPAPDCNFAGVYKDLYSHYDADHKDTT
RRFVCGTPHHTYLAPGPGPKISVLQEYRVGPLVVVQCFEGAQGMSLTVNCIAPSAPGVGK
FSFDLTHSLGRQTVTFGSTEMNRIQRVSLETPEEDFMSIPSYLVSPIMIKNLRICIRRLE
QEEDGEEEEEEEKEEEEEEEEASEEDDQEEADEDYDDDEGEADEVDVVNNVRRSTRQKKV
NSKYQNKVK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaagacgaacgccgagaaagctgtcgctggagaagcgtcgagcagcagcagc
agccgccgaaagagacaacggcttccttccgttgctgaagatgaaggcagaggagtaacg
gcgagtgtagacgaagatgaagtgataactccggaggcacgatcggggacgctgctcgat
ttggaccttctcgattgtcccgtttgcttggaagcactgaccaaacatgtctttcagtgt
gacaacggacacatagcttgttcgtcttgctgtctcaaactgagaaacaaatgccccgcc
tgcgctttgcccatcggtaacaaccgatgcagaatcgtagagagaatcgtcgaattagtc
accgtcccgtgtccgaactcaaaacatggctgtacggagaagttctcttacggcaaagaa
tcagcacatgaggaggaatgcggtttcgctctttgctactgccctgcaccggactgcaac
ttcgctggtgtgtacaaagatctctacagtcattacgatgctgaccacaaggatacaacg
aggcgtttcgtgtgtggcactccccaccacacatatctcgcccctggcccaggcccgaag
atttcagtccttcaggaatacagagttggtccgttggttgtggttcagtgtttcgagggg
gcgcaaggaatgtctttgactgtgaactgtatagctccgtctgctccaggagttgggaag
ttttcctttgatttgacccactctttgggacgtcagactgtgacgtttggatcgacggag
atgaataggattcagagagtgagcttggaaactcctgaggaagactttatgtcgattcct
tcctatttggtttcaccaattatgattaagaacttgcgtatttgcatccgccggctagaa
caagaagaagatggtgaagaggaagaggaagaggagaaggaagaggaagaagaagaagaa
gaagctagtgaagaagatgaccaagaagaagctgatgaagattatgatgatgatgaagga
gaagctgatgaggttgacgttgttaacaatgttcgcaggtcaactcgtcagaagaaggtt
aactccaaataccaaaacaaagtcaagtaa
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