KEGG   Raphanus sativus (radish): 108830412
Entry
108830412         CDS       T06014                                 
Name
(RefSeq) novel plant SNARE 11
  KO
K08494  novel plant SNARE
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108830412
Membrane trafficking [BR:rsz04131]
 SNARE
  SNAP-25[N] (Qb)
   NPSN
    108830412
SSDB
Motif
Pfam: Sec20 V-SNARE_C V-SNARE NPV_P10 Prominin Occludin_ELL MCPsignal DUF948 JAKMIP_CC3 DUF713 Laminin_II DUF7605 DUF2203 Syntaxin_2 LRS4 TMPIT ANIS5_cation-bd Vps53_N Endotoxin_N DUF3450 Zw10_N STX6_10_61_N
Other DBs
NCBI-GeneID: 108830412
NCBI-ProteinID: XP_018459511
UniProt: A0A6J0LJC8
LinkDB
Position
3:complement(17640087..17642624)
AA seq 265 aa
MVDVSAVSEELAELEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIK
DFDREVKSLESGNDANTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPA
EDHMEENVLLASNMSNQELMNKGNSMMDDTDQAIERGKKIVLETINVGTDTSAALKAQTD
QMSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNN
KDIRDIPGLGLAPPAMNRRLLWNHY
NT seq 798 nt   +upstreamnt  +downstreamnt
atggtggatgtatcggcggttagcgaagagctggctgagctcgaaggacaaatcaatgac
atcttccgtgctctgtcaaatggattccagaagctggagaagatcaaagatgctaatagg
cagagtaggcagctcgaagagctcactgataaaatgcgtgactgcaagagccttattaaa
gatttcgatagggaagtcaaaagcttggaaagtggaaacgatgccaacactaaccggatg
ctgaacgatagacgtcaatctatggttaaggaactaaactcatatgttgctcttaagaag
aaatattcatccaatctggcaagcaataacaagcgagtagatcttttcgatggacctgct
gaagaccacatggaagagaatgtcttacttgcttcaaacatgtccaatcaagaactaatg
aataaaggaaactccatgatggatgacactgatcaagcaattgaaagggggaaaaagatt
gttctggagactataaatgtgggaacagatacttcagcagctctcaaggctcagaccgac
caaatgagtagagtcgtcaatgaacttgattctatccatttctcactcaagaaggcctcc
aagctggtcaaggaaattggtaggcaggttgccacagacaaatgtattatggcattcctt
ttccttattgtcattggtgtaatagccatcatcatcgtcaagattgtgaacccaaacaac
aaagacatccgtgacatacctggcctaggcctagctcccccagccatgaacagacgttta
ctctggaaccattactga

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