Raphanus sativus (radish): 108830448
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Entry
108830448 CDS
T06014
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108830448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108830448
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108830448
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108830448
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108830448
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108830448
Messenger RNA biogenesis [BR:
rsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108830448
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP60 / Chaperonin
108830448
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108830448
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108830448
Exosomal proteins of other body fluids (saliva and urine)
108830448
Exosomal proteins of breast cancer cells
108830448
Exosomal proteins of colorectal cancer cells
108830448
Exosomal proteins of bladder cancer cells
108830448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108830448
NCBI-ProteinID:
XP_018459548
UniProt:
A0A6J0LI20
LinkDB
All DBs
Position
5:complement(37158979..37162491)
Genome browser
AA seq
572 aa
AA seq
DB search
MYRVLSKLSSSIGSSTSRKLVSGRIISSRNYVAKDISFGIGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIESSYGAPKITKDGVTVAKSISFESNAKNMGAELVKQVANATNKVAGDGTT
CATVLTQAILTEGCKSVAAGVNVMDLRSGINMAIDAVVSDLKSRAVMISTPEEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGNTLENELEVVEGMKLARGYISPYFITDEKT
QKCELENPIILIHEKKVSDMNSLLKVLEAAVKSSRPLLVVAEDVESDALAMLILNKHHAG
LKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLTLDKIRPELLGTAKKVTISRDDT
LILHGGGDKKLIEERCEELRSANEKSTSTFDKEKTQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLETHNEDQRRGVQIVQNALKAP
ALTIAANAGYDGSLVVGKLLEQNDCNFGFDAAKGSYVDMVKAGIIDPVKVIKTALTDAAS
VSLLLTTTEASVLVKGEEKTQKHVPDMAGMGM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagtgctgtcaaagttatcttcttcaattggctcctctacttcccggaaactg
gtttcgggaaggattataagcagcagaaactatgtggctaaggatatcagttttgggatt
ggtgctcgtgctgctatgttgcaaggtgtttccgaggttgctgaagccgtcaaagtcact
atgggaccaaagggaagaaatgtgataattgagagcagttatggcgcaccgaagatcaca
aaagatggtgtcaccgtggccaaaagtatttcgtttgagtcgaacgctaagaatatgggt
gctgagctcgttaaacaggtcgctaatgccactaacaaggttgctggagatggtaccact
tgtgcgaccgttttgactcaggcgatactcaccgaaggttgcaagtcagtggctgctggt
gtgaatgtgatggatttgcgtagtggtataaacatggcaattgatgcagttgtctctgat
ttgaaaagcagagctgttatgattagcaccccagaagagatcacacaggttgctactata
tctgcaaacggagagcgtgagattggggaattaattgcaagagccatggagaaagttgga
aaggaaggggttataactgttgctgatgggaatactttagagaacgagctagaagtagtg
gaaggaatgaagctagccagaggttacatctctccttattttatcacagatgagaagact
cagaaatgcgagcttgagaatcccatcatcctcatccatgagaagaaggtttcagacatg
aactcgttgttgaaagttctagaggcagctgtgaagagcagcagaccacttcttgttgta
gcagaagatgtagagagtgatgcattagctatgctgattctcaataagcatcatgctggg
cttaaggtatgcgctatcaaggctccaggttttggtgacaacaggaaagcaagcttagat
gatcttgcagttcttactggtgcagaggttatctctgaggagcgcggtctaactcttgac
aagattcgtcctgaattgcttggaactgcgaagaaggtcacaatctctcgtgatgatact
ctcatcctccacggtggtggcgacaagaagctaattgaagaaagatgtgaagagttaaga
tcagcaaatgaaaaaagcacatccacatttgataaagagaaaacgcaagaacgactctca
aaactatcaggtggtgttgcagtcttcaaggtgggaggagcaagtgaagctgaagttgga
gaaagaaaagacagagtcactgatgctttgaatgctacaagagcagccgtagaagaaggc
atcatacctggtggtggtgtggctttgttatatgctacaaaagctttagacaaccttgaa
actcataacgaggatcaaagaagaggtgttcagatagttcagaatgctctcaaggctcct
gctttgacaatagctgcaaatgctggttacgatggttctttagtggttggcaagttacta
gagcaaaacgattgcaatttcggtttcgatgctgccaaaggttcgtatgttgatatggtg
aaagctggaatcatagacccggtcaaggttatcaaaaccgcattaaccgatgctgctagc
gtttctttgctgttgacaacaacagaggcctcagtgcttgtgaagggagaggagaaaact
caaaagcatgtccctgatatggctggcatgggcatgtga
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