KEGG   Raphanus sativus (radish): 108830548
Entry
108830548         CDS       T06014                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108830548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108830548
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rsz02044]
    108830548
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108830548
Secretion system [BR:rsz02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108830548
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 Beta-prop_EIPR1 TPR_Sec16 TPR_GEMI5 Beta-prop_EML Beta-prop_DCAF4 MIOS_WD40 SRA1 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 108830548
NCBI-ProteinID: XP_018459646
UniProt: A0A6J0LJT0
LinkDB
Position
4:50099020..50105322
AA seq 1111 aa
MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRELTQVGE
ITSSERFNRIAWGRNGSGSEEFSMGLIAGGLVDGNIDLWNPLSLTGSKSSENALVGHLSV
HKGPVRGLEFNAITPNLLASGADDGEICIWDLTKPSEPSHFPLLKGTGSATQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPIINFSDSVRRRCSVLQWNPDIATQIMVASDDDT
SPTLKLWDMRNTMSPVREFTGHEKGVIAMEWCPSDSSYLLTCAKDNRTICWDTNKAEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEENTFGSAPLRAPKWF
KRPVGASFGFGGKLVSFHAKASVKGTSSIPSEVFLHSLVTEQSLVSRTSEFDAAIENGDK
TSLRGLCEKKSEETESEEEKETWGLLKIMFEDEGTTRTKLISHLGFSLPSVEKDQAVDGL
SSDLNGTGLEDTVAHAPEPLETDEAAAFAMDNGEDFFNNFPAKPDTPVSTASAKDFMAPE
TDFAGKLEETQEMPEEEEESSDLVFDDAIQRALVVGDYKEAVDQCISAKKMADALVIAHV
GGTSLWESTREKYLKKSRAPYMKVVSAMVNNDLTSLIYTRSPKFWKETLALLCTFAQGEQ
WATLCDVLASKLMDAGNTLAAVLCYICAGNVDRTVEIWSRSLANEREGRSYAELLQDLME
KTLVLALATGNKKFSASLCKLFESYAEILASQGLLITAMKYLKVLDSGGLSPELSILRDR
ISLSAEPETNTAASGNIQPQSTVPYNQEPTQAQPNIISNPYDNQYQQSYTNSYGGEYVPT
ASHPPMQQATMFMPHQAQPAPQPSYPPSHASNAQPSMRTTFVPSTPPALKNADQYQQPTI
GSHSFTGPSNNAYPAPPGPGSYVSSGPSQIGQYPNPRMPQVVGPGAGPIGFTPMSTPGVA
PRSLIGSVQPASPPTHQAAAQAAPAPAAPPPTVQTADTSNVPAHQKPVIATLTRLFNETS
EALGGARANPTKKREIEDNSRKLGALFVRLNSGDISKNAADKLAQLCHALDNHDFGAALQ
IQVLLTTSEWDECNFWLSTLKRMIKSRQNAR
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtgggcagatccgcctccgtggcactggctcccgacgctccg
tacatggcggcgggaaccatggcgggagcagtggatctgtcctttagttcgtcggccaat
ctggagatcttcaagctcgattttcagtctgaggatcgggaattaacacaggtaggggaa
ataacgagctcggagagattcaatagaatagcatggggaagaaacggatctggttcagag
gaattctccatgggtctaattgcgggcggacttgtggatggaaatatagatctatggaat
ccactttctctaacaggttccaagtcgagtgaaaatgcactggttggacatctttcggtt
cacaaagggcccgttcgtggtctcgagttcaatgctatcaccccaaatctactcgcctcc
ggcgctgatgatggtgaaatttgcatttgggatttaactaagccttctgagccttctcat
tttccacttctcaagggtactggttctgccacccaaggtgaaatctcctttatttcgtgg
aacagaaaagttcaacagatattagcatctacctcatacaatgggactactgttatatgg
gacttgaggaagcagaaaccgattattaacttttcagattctgttcgacgtcggtgctct
gttttacaatggaaccctgacattgctactcagataatggttgcatcagatgacgacact
tcacctactcttaagctctgggacatgaggaatacaatgtcacctgtgcgcgagtttact
ggacacgaaaaaggtgtgattgcaatggagtggtgtccaagtgacagttcatatcttctt
acctgtgctaaagacaaccgaactatttgctgggacactaataaagcagagattgtagct
gagttacctgctggcaacaattggaattttgatgttcattggtacccaaagattcctgga
gttatatcagcatcttcatttgatgggaaaattggcatctacaacatcgagggttgcagt
cgctatggtgctgaagagaatacttttgggtctgctcctttaagagcaccaaaatggttt
aagcgcccagttggtgcatcgtttggatttgggggaaaacttgtatcctttcatgcaaag
gcctcagtgaagggtacctcaagcattccatctgaggtttttctgcacagcctggtgaca
gaacagagtttggtgagtcgaacttctgaatttgatgccgcaatagaaaatggtgataag
acttctctaaggggtttgtgtgagaagaaatctgaagagactgaatccgaagaggagaag
gagacatggggcttgctgaaaatcatgttcgaagatgaaggaactacaaggacaaagttg
atcagccatctcggctttagtttaccttccgtggaaaaggatcaggcagtggatgggctc
tcgtcagatctaaatggcactggattagaggatactgtggcgcatgcaccggagcctttg
gaaactgacgaggcagctgcatttgctatggacaatggagaggacttctttaacaacttt
cctgctaaacctgatacacctgtatctactgcatctgccaaagattttatggctcctgag
acagattttgctggcaaattagaagaaactcaagaaatgccagaagaagaggaagaaagt
tctgacctagtatttgatgatgccatccagcgtgctttagttgttggagattacaaggaa
gcggtggatcagtgtatatctgcgaagaagatggctgatgctttagttattgctcatgtt
ggtggtacatcattgtgggagagcactcgtgagaaatatctgaagaagagcagggcacct
tacatgaaggttgtttctgcgatggtaaacaacgatctcacgagccttatctatacaagg
tcacccaagttctggaaagaaactcttgctctactctgtacttttgcacaaggagaacaa
tgggccaccctgtgtgatgtacttgcctcaaagttgatggatgctggtaacactctggct
gcagttctgtgctacatttgcgcaggcaatgttgacagaacagtagaaatttggtcaagg
agccttgcaaacgagcgtgaaggaagatcttatgctgagcttcttcaggatcttatggag
aagactcttgttcttgctttggcaactggcaacaaaaagttcagcgcatctctttgtaaa
ctctttgagagttatgctgagatattggccagccaagggcttcttataacggcaatgaag
tacttgaaagttttggattcgggtggcttgtcacctgaactttctatattacgtgatcgt
atttccctttcagcagaacctgagactaacactgcagcttcaggcaacattcagcctcaa
agcaccgtaccatataatcaggagccaacgcaggcgcaaccaaacattatcagtaaccca
tatgataatcagtatcaacaatcatacactaattcttatggtggagaatatgtgcccaca
gcttcacatccacccatgcaacaagcaaccatgtttatgcctcaccaagctcagccagca
ccgcagccatcatatcctccgtcacatgcaagcaatgctcaaccatccatgagaactact
tttgttccttcaactccccctgcactgaagaacgcagaccaatatcagcagccaaccatt
ggttctcattcattcaccggaccatctaacaatgcataccccgctcctcctggtcctggt
tcatatgtatcttctggcccttcacaaattgggcaatatcctaaccccagaatgccccaa
gtagttggtccaggagctggacccataggatttacacctatgtcaactccaggggttgct
ccaagatctcttataggttctgtgcaaccagcaagtcctccaacacatcaggcagctgcg
caggcagcccctgctcctgcagctcctccaccaactgttcagactgcagatacttccaac
gtcccagcccaccagaaacctgtgatagcaacactgacaaggcttttcaatgagacatcc
gaagcactgggaggcgcacgtgcaaatcctaccaagaagcgcgagatagaagacaactca
aggaaattaggtgctctgtttgtgagactgaatagcggagacatctccaagaatgctgcc
gataaactcgcacagctctgccatgctctggacaatcatgacttcggtgcagcccttcag
atacaggtacttctgacgaccagcgaatgggatgaatgcaacttctggctttccacattg
aagcggatgatcaaaagcaggcaaaatgcgcggtga

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